Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3262

Experiment: KB with Trimethoprim 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Trimethoprim 125 ug/ml
3,906,307	+				+0.0
3,906,307	+				+0.3
3,906,307	+				-2.4
3,906,307	+				+0.6
3,906,307	+				+3.2
3,906,307	+				-2.2
3,906,307	+				-0.9
3,906,307	+				-0.1
3,906,307	+				-0.6
3,906,308	-				-1.2
3,906,308	-				-0.1
3,906,308	-				+1.1
3,906,308	-				+0.6
3,906,308	-				+0.6
3,906,435	+				-0.6
3,906,435	+				+1.6
3,906,478	+				+0.7
3,906,487	-				+1.8
3,906,489	+				-0.4
3,906,700	+		Psyr_3262	0.14	-1.0
3,906,700	+		Psyr_3262	0.14	-1.3
3,906,700	+		Psyr_3262	0.14	-0.7
3,906,701	-		Psyr_3262	0.15	-0.4
3,906,701	-		Psyr_3262	0.15	+2.2
3,907,006	+				-0.4
3,907,006	+				-1.5
3,907,006	+				-2.2
3,907,006	+				-0.2
3,907,007	-				-1.7
3,907,007	-				+0.3
3,907,007	-				-0.4
3,907,049	-				-1.1
3,907,096	+				-0.4
3,907,097	-				+1.5
3,907,136	+				-0.2
3,907,421	-				+1.6
3,907,434	+				+1.3
3,907,434	+				+1.6
3,907,434	+				+0.1
3,907,435	-				+1.1
3,907,435	-				+1.4
3,907,435	-				-0.3
3,907,435	-				-0.3
3,907,702	+		Psyr_3263	0.34	+0.2
3,907,702	+		Psyr_3263	0.34	-1.2
3,907,702	+				-1.7
3,907,702	+		Psyr_3263	0.34	+0.3
3,907,703	-		Psyr_3263	0.35	+0.6
3,907,703	-		Psyr_3263	0.35	+0.5
3,907,734	+		Psyr_3263	0.38	-0.4
3,907,734	+		Psyr_3263	0.38	-0.4
3,907,734	+		Psyr_3263	0.38	+0.2
3,907,735	-		Psyr_3263	0.38	+0.2
3,907,735	-		Psyr_3263	0.38	-0.5
3,907,735	-		Psyr_3263	0.38	+0.1
3,907,735	-		Psyr_3263	0.38	-0.4
3,907,740	+				+0.6
3,907,740	+		Psyr_3263	0.38	+0.9
3,907,740	+		Psyr_3263	0.38	-0.4
3,907,741	-		Psyr_3263	0.38	+0.6
3,907,741	-		Psyr_3263	0.38	+0.1
3,907,741	-		Psyr_3263	0.38	+0.2
3,907,741	-		Psyr_3263	0.38	+0.1
3,907,741	-		Psyr_3263	0.38	-0.7
3,907,759	-		Psyr_3263	0.40	+0.5
3,907,836	+		Psyr_3263	0.47	-0.5
3,907,837	-		Psyr_3263	0.48	+1.1
3,907,875	+		Psyr_3263	0.51	-1.5
3,907,944	-		Psyr_3263	0.58	+0.2
3,907,945	+		Psyr_3263	0.58	-0.4
3,907,945	+		Psyr_3263	0.58	+0.4
3,907,945	+		Psyr_3263	0.58	-1.5
3,907,945	+		Psyr_3263	0.58	+0.2
3,907,945	+		Psyr_3263	0.58	-1.9
3,907,945	+		Psyr_3263	0.58	+0.6
3,907,946	-		Psyr_3263	0.58	+0.6