Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3037

Experiment: KB with Trimethoprim 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Trimethoprim 125 ug/ml
3,636,036	+				-0.0
3,636,036	+				+0.6
3,636,037	-				-1.4
3,636,037	-				+0.2
3,636,037	-				-0.4
3,636,076	+				-0.2
3,636,096	+				-0.2
3,636,096	+				-1.0
3,636,099	+				+1.3
3,636,099	+				+0.8
3,636,099	+				-0.3
3,636,099	+				-0.2
3,636,099	+				+0.6
3,636,099	+				-0.1
3,636,100	-				+0.7
3,636,100	-				-0.2
3,636,100	-				-1.6
3,636,288	+				+1.3
3,636,288	+				+0.2
3,636,350	+				-2.0
3,636,350	+				-1.4
3,636,350	+				-1.9
3,636,350	+				-0.0
3,636,350	+				-1.5
3,636,350	+				-1.4
3,636,350	+				-0.3
3,636,351	-				+0.6
3,636,351	-				+1.0
3,636,351	-				-0.7
3,636,351	-				-0.1
3,636,351	-				+0.5
3,636,351	-				-0.0
3,636,351	-				-0.2
3,636,485	-		Psyr_3036	0.27	+0.1
3,636,485	-		Psyr_3036	0.27	+0.3
3,636,784	-		Psyr_3036	0.73	-0.1
3,636,784	-		Psyr_3036	0.73	+0.4
3,636,960	+				+0.2
3,637,182	-		Psyr_3037	0.15	+0.4
3,637,318	-		Psyr_3037	0.25	-0.7
3,637,505	+		Psyr_3037	0.38	+1.0
3,637,506	-		Psyr_3037	0.38	+0.3
3,637,506	-		Psyr_3037	0.38	-0.4
3,637,575	+		Psyr_3037	0.43	+0.2
3,637,575	+		Psyr_3037	0.43	+1.0
3,637,636	+		Psyr_3037	0.48	-0.1
3,637,636	+		Psyr_3037	0.48	+2.1
3,637,637	-		Psyr_3037	0.48	+0.2
3,637,682	+		Psyr_3037	0.51	+0.6
3,637,682	+		Psyr_3037	0.51	+1.1
3,637,682	+		Psyr_3037	0.51	+0.3
3,637,682	+		Psyr_3037	0.51	+1.6
3,637,682	+		Psyr_3037	0.51	+0.1
3,637,682	+		Psyr_3037	0.51	+0.6
3,637,682	+		Psyr_3037	0.51	+0.6
3,637,682	+		Psyr_3037	0.51	+1.2
3,637,682	+		Psyr_3037	0.51	+0.8
3,637,683	-		Psyr_3037	0.51	+0.3
3,637,683	-		Psyr_3037	0.51	+0.4
3,637,683	-		Psyr_3037	0.51	-0.2
3,637,683	-		Psyr_3037	0.51	-0.2
3,637,683	-		Psyr_3037	0.51	+1.6
3,637,683	-		Psyr_3037	0.51	+0.1
3,637,689	-		Psyr_3037	0.52	-1.1
3,637,708	-		Psyr_3037	0.53	-0.1
3,637,913	-		Psyr_3037	0.68	-0.7
3,637,933	+		Psyr_3037	0.70	+0.3
3,637,934	-		Psyr_3037	0.70	+0.7
3,637,954	-		Psyr_3037	0.71	+0.3
3,638,223	+				-0.7
3,638,223	+				+0.9
3,638,223	+				+0.6
3,638,223	+				-0.2
3,638,223	+				+0.9
3,638,223	+				+0.2
3,638,224	-				+0.6
3,638,224	-				-0.2
3,638,224	-				-1.4
3,638,224	-				+0.8
3,638,224	-				-0.2
3,638,224	-				-0.2
3,638,224	-				-0.6
3,638,224	-				-1.2
3,638,224	-				+0.3
3,638,409	+				+2.2
3,638,410	-				+0.1
3,638,459	+				+0.6
3,638,460	-				-0.0
3,638,460	-				+0.0
3,638,510	+		Psyr_3038	0.20	-0.4
3,638,723	+				+0.7
3,638,746	+				+0.7
3,638,746	+				-0.6
3,638,747	-				+0.1
3,638,747	-				-1.0
3,638,859	+				+0.3
3,638,859	+				+0.1
3,638,860	-				-0.8
3,638,860	-				-0.2
3,638,874	+				-0.8
3,638,875	-				-0.2
3,638,875	-				+0.8
3,639,100	+		Psyr_3039	0.74	-0.4
3,639,100	+		Psyr_3039	0.74	-0.2
3,639,101	-		Psyr_3039	0.74	-0.7
3,639,101	-		Psyr_3039	0.74	-0.7
3,639,133	-		Psyr_3039	0.84	-0.5
3,639,155	+				+0.8
3,639,155	+				-0.1
3,639,259	+				-1.0
3,639,259	+				-2.0
3,639,260	-				-0.0