Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2632

Experiment: KB with Trimethoprim 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Trimethoprim 125 ug/ml
3,193,742	-		Psyr_2631	0.63	+0.9
3,193,815	-		Psyr_2631	0.66	+0.3
3,193,977	+		Psyr_2631	0.72	+1.6
3,193,978	-		Psyr_2631	0.72	-1.0
3,194,112	+		Psyr_2631	0.77	+1.5
3,194,499	+				+1.6
3,194,717	+				+0.4
3,194,717	+				-1.5
3,194,717	+				-0.3
3,194,717	+				-0.6
3,194,718	-				+3.6
3,194,718	-				+1.6
3,194,775	-				+0.3
3,194,810	+				+0.0
3,194,810	+				-1.0
3,194,810	+				-0.4
3,194,811	-				+1.6
3,194,811	-				-0.2
3,194,811	-				-0.7
3,194,811	-				+0.4
3,195,026	+				+0.9
3,195,027	-				+0.1
3,195,027	-				+0.5
3,195,027	-				+1.2
3,195,027	-				+0.5
3,195,027	-				-0.7
3,195,027	-				+1.4
3,195,269	+		Psyr_2632	0.17	-1.6
3,195,270	-		Psyr_2632	0.17	+0.3
3,195,307	+		Psyr_2632	0.18	-1.0
3,195,307	+		Psyr_2632	0.18	+0.2
3,195,307	+		Psyr_2632	0.18	+0.1
3,195,307	+		Psyr_2632	0.18	+0.0
3,195,308	-		Psyr_2632	0.18	+0.0
3,195,308	-		Psyr_2632	0.18	-0.3
3,195,308	-		Psyr_2632	0.18	-0.9
3,195,439	+		Psyr_2632	0.22	-2.2
3,195,439	+				-1.7
3,195,440	-		Psyr_2632	0.22	+1.0
3,195,441	+		Psyr_2632	0.22	-2.0
3,195,441	+		Psyr_2632	0.22	-2.8
3,195,441	+		Psyr_2632	0.22	+0.6
3,195,441	+		Psyr_2632	0.22	-0.4
3,195,441	+		Psyr_2632	0.22	+0.1
3,195,441	+		Psyr_2632	0.22	-0.5
3,195,442	-		Psyr_2632	0.22	-1.1
3,195,442	-		Psyr_2632	0.22	+1.2
3,195,442	-		Psyr_2632	0.22	-1.0
3,195,442	-		Psyr_2632	0.22	-0.4
3,195,442	-		Psyr_2632	0.22	-0.7
3,195,442	-		Psyr_2632	0.22	+0.1
3,195,443	+		Psyr_2632	0.22	+0.2
3,195,443	+		Psyr_2632	0.22	-0.4
3,195,443	+		Psyr_2632	0.22	+0.1
3,195,443	+		Psyr_2632	0.22	-0.3
3,195,443	+		Psyr_2632	0.22	+0.6
3,195,443	+		Psyr_2632	0.22	-1.0
3,195,443	+		Psyr_2632	0.22	+0.2
3,195,443	+		Psyr_2632	0.22	-1.7
3,195,443	+		Psyr_2632	0.22	-0.4
3,195,443	+		Psyr_2632	0.22	-2.0
3,195,444	-		Psyr_2632	0.22	+1.3
3,195,444	-		Psyr_2632	0.22	+0.6
3,195,444	-		Psyr_2632	0.22	+0.4
3,195,444	-		Psyr_2632	0.22	+1.0
3,195,444	-		Psyr_2632	0.22	-1.7
3,195,665	+		Psyr_2632	0.30	-0.9
3,195,665	+		Psyr_2632	0.30	-1.6
3,195,665	+		Psyr_2632	0.30	-0.6
3,195,752	+		Psyr_2632	0.32	+2.6
3,195,753	-		Psyr_2632	0.32	+0.9
3,195,753	-		Psyr_2632	0.32	-0.2
3,195,753	-		Psyr_2632	0.32	-0.9
3,195,762	-		Psyr_2632	0.33	-0.1
3,196,056	-		Psyr_2632	0.42	-0.9
3,196,199	+		Psyr_2632	0.47	-0.6
3,196,199	+		Psyr_2632	0.47	+1.9
3,196,200	-		Psyr_2632	0.47	-1.4
3,196,200	-				+1.2
3,196,200	-		Psyr_2632	0.47	-1.0
3,196,205	+		Psyr_2632	0.47	-2.2
3,196,379	-		Psyr_2632	0.52	-1.9
3,196,393	+		Psyr_2632	0.53	-0.2
3,196,554	-		Psyr_2632	0.58	+1.0
3,196,602	-		Psyr_2632	0.59	+1.0
3,196,650	+		Psyr_2632	0.61	+1.0
3,196,651	-		Psyr_2632	0.61	-0.1
3,196,679	+		Psyr_2632	0.62	+0.6
3,196,730	+		Psyr_2632	0.63	+0.6
3,196,730	+		Psyr_2632	0.63	+0.3
3,196,730	+		Psyr_2632	0.63	-1.2
3,196,731	-		Psyr_2632	0.64	+1.8
3,196,768	-		Psyr_2632	0.65	-1.7
3,196,964	+		Psyr_2632	0.71	-1.4
3,196,964	+		Psyr_2632	0.71	-2.2
3,196,964	+		Psyr_2632	0.71	-1.6
3,196,964	+		Psyr_2632	0.71	+0.6
3,196,964	+		Psyr_2632	0.71	+1.3
3,196,964	+		Psyr_2632	0.71	-2.9
3,196,965	-		Psyr_2632	0.71	-1.0
3,196,965	-		Psyr_2632	0.71	+0.6
3,196,965	-		Psyr_2632	0.71	-1.1
3,196,965	-		Psyr_2632	0.71	-0.3
3,196,965	-		Psyr_2632	0.71	-1.4
3,196,965	-		Psyr_2632	0.71	+0.2
3,196,965	-		Psyr_2632	0.71	+0.9
3,196,965	-		Psyr_2632	0.71	-0.6
3,196,965	-		Psyr_2632	0.71	-0.1
3,196,965	-		Psyr_2632	0.71	-1.0
3,196,965	-		Psyr_2632	0.71	-0.2
3,196,965	-		Psyr_2632	0.71	+0.5
3,196,965	-		Psyr_2632	0.71	-2.4
3,197,035	+		Psyr_2632	0.73	-1.6
3,197,036	-		Psyr_2632	0.73	-0.0
3,197,071	+				-0.7
3,197,101	+		Psyr_2632	0.75	-2.3
3,197,102	-		Psyr_2632	0.75	-0.2
3,197,183	+		Psyr_2632	0.78	-0.1
3,197,353	+		Psyr_2632	0.83	+0.6
3,197,353	+		Psyr_2632	0.83	+0.4
3,197,353	+		Psyr_2632	0.83	+0.0
3,197,353	+		Psyr_2632	0.83	+0.1
3,197,353	+		Psyr_2632	0.83	-0.6
3,197,353	+		Psyr_2632	0.83	+0.4
3,197,354	-		Psyr_2632	0.83	+2.2
3,197,354	-		Psyr_2632	0.83	-0.1
3,197,378	+		Psyr_2632	0.84	-0.2
3,197,379	-		Psyr_2632	0.84	-0.8
3,197,379	-		Psyr_2632	0.84	+0.3
3,197,699	+				+0.6
3,197,699	+				+0.8
3,197,699	+				-1.2
3,197,699	+				-0.9
3,197,700	-				+0.6
3,197,700	-				+0.9
3,197,742	+				+0.2
3,197,742	+				+1.1
3,197,879	-				+0.6
3,197,887	+				+0.4
3,197,927	-				+0.2
3,198,450	-		Psyr_2633	0.42	+0.5
3,198,486	+		Psyr_2633	0.44	-0.1
3,198,486	+		Psyr_2633	0.44	-1.0
3,198,486	+		Psyr_2633	0.44	-1.8
3,198,487	-		Psyr_2633	0.44	+2.6
3,198,730	+		Psyr_2633	0.62	+0.6
3,198,731	-		Psyr_2633	0.62	+0.6
3,198,731	-		Psyr_2633	0.62	-0.8
3,198,800	-		Psyr_2633	0.67	+0.1
3,198,800	-		Psyr_2633	0.67	-1.4
3,198,853	+		Psyr_2633	0.71	-1.0
3,198,853	+		Psyr_2633	0.71	-0.6
3,198,853	+		Psyr_2633	0.71	-1.2
3,198,853	+		Psyr_2633	0.71	-0.3
3,198,853	+		Psyr_2633	0.71	-1.0
3,198,854	-		Psyr_2633	0.71	-0.1