Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2621

Experiment: KB with Trimethoprim 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Trimethoprim 125 ug/ml
3,178,031	+		Psyr_2620	0.48	+0.3
3,178,184	-		Psyr_2620	0.58	-0.4
3,178,429	-		Psyr_2620	0.75	-0.6
3,178,705	-				+1.6
3,178,788	+				+0.0
3,178,788	+				-1.3
3,179,182	-		Psyr_2621	0.37	-0.4
3,179,568	-		Psyr_2621	0.72	-1.5
3,179,568	-		Psyr_2621	0.72	+1.0
3,179,568	-		Psyr_2621	0.72	+0.2
3,179,609	+		Psyr_2621	0.75	-1.0
3,179,609	+		Psyr_2621	0.75	-0.6
3,179,609	+		Psyr_2621	0.75	-1.2
3,179,610	-		Psyr_2621	0.75	-1.7
3,179,610	-		Psyr_2621	0.75	-0.1
3,179,610	-		Psyr_2621	0.75	-1.0
3,179,693	+		Psyr_2621	0.83	-1.1
3,179,693	+		Psyr_2621	0.83	-2.1
3,179,693	+		Psyr_2621	0.83	-0.3
3,179,693	+		Psyr_2621	0.83	+2.3
3,179,694	-		Psyr_2621	0.83	-0.6
3,179,933	+				-0.8
3,180,200	+		Psyr_2622	0.11	-0.4
3,180,280	-		Psyr_2622	0.13	+0.1
3,180,298	+		Psyr_2622	0.14	+0.3
3,180,298	+		Psyr_2622	0.14	+0.3
3,180,298	+		Psyr_2622	0.14	+0.0
3,180,299	-		Psyr_2622	0.14	-0.4
3,180,299	-		Psyr_2622	0.14	+1.3
3,180,299	-		Psyr_2622	0.14	+0.7
3,180,299	-				+1.2
3,180,381	-		Psyr_2622	0.17	+0.6
3,180,381	-		Psyr_2622	0.17	+0.6
3,180,801	-		Psyr_2622	0.30	+0.8
3,180,874	-		Psyr_2622	0.33	+1.6