Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2438

Experiment: KB with Trimethoprim 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Trimethoprim 125 ug/ml
2,822,128	+		Psyr_2437	0.15	-2.4
2,822,128	+		Psyr_2437	0.15	+1.2
2,822,128	+		Psyr_2437	0.15	+0.3
2,822,128	+		Psyr_2437	0.15	-0.3
2,822,128	+		Psyr_2437	0.15	+0.4
2,822,128	+		Psyr_2437	0.15	+0.6
2,822,128	+		Psyr_2437	0.15	-0.8
2,822,128	+		Psyr_2437	0.15	+0.8
2,822,128	+		Psyr_2437	0.15	-1.2
2,822,129	-		Psyr_2437	0.15	-1.4
2,822,129	-		Psyr_2437	0.15	+0.6
2,822,129	-		Psyr_2437	0.15	+0.6
2,822,129	-		Psyr_2437	0.15	-0.2
2,822,402	-		Psyr_2437	0.40	+0.4
2,822,402	-		Psyr_2437	0.40	+1.0
2,822,481	+		Psyr_2437	0.47	+0.4
2,822,500	+		Psyr_2437	0.49	+0.3
2,822,500	+		Psyr_2437	0.49	+0.6
2,822,708	+		Psyr_2437	0.68	-0.7
2,822,709	-		Psyr_2437	0.68	+0.6
2,822,807	-		Psyr_2437	0.77	+0.3
2,822,815	+		Psyr_2437	0.77	-0.0
2,822,816	-		Psyr_2437	0.77	-0.6
2,822,816	-		Psyr_2437	0.77	-0.7
2,823,097	+				-0.5
2,823,229	+		Psyr_2438	0.16	+0.7
2,823,230	-		Psyr_2438	0.16	-0.4
2,823,442	+		Psyr_2438	0.41	+0.2
2,823,442	+		Psyr_2438	0.41	+0.2
2,823,442	+		Psyr_2438	0.41	-0.0
2,823,448	+		Psyr_2438	0.42	+0.1
2,823,448	+		Psyr_2438	0.42	+1.4
2,823,448	+		Psyr_2438	0.42	-1.4
2,823,448	+		Psyr_2438	0.42	-0.0
2,823,448	+		Psyr_2438	0.42	-0.8
2,823,449	-		Psyr_2438	0.42	+1.3
2,823,487	+		Psyr_2438	0.47	-0.1
2,823,487	+		Psyr_2438	0.47	+1.2
2,823,487	+		Psyr_2438	0.47	+1.2
2,823,487	+		Psyr_2438	0.47	-0.0
2,823,487	+		Psyr_2438	0.47	+0.6
2,823,487	+		Psyr_2438	0.47	+0.0
2,823,488	-		Psyr_2438	0.47	+1.7
2,823,488	-		Psyr_2438	0.47	-0.9
2,823,488	-		Psyr_2438	0.47	-0.1
2,823,488	-		Psyr_2438	0.47	-0.2
2,823,488	-		Psyr_2438	0.47	-0.8
2,823,488	-		Psyr_2438	0.47	+2.8
2,823,544	+		Psyr_2438	0.54	-0.8
2,823,545	-		Psyr_2438	0.54	+2.1
2,823,545	-		Psyr_2438	0.54	-1.2
2,823,743	+		Psyr_2438	0.78	-1.4
2,823,752	-		Psyr_2438	0.79	+1.6
2,823,752	-		Psyr_2438	0.79	+0.7
2,824,004	-				-0.6
2,824,070	+		Psyr_2439	0.14	-1.1
2,824,070	+		Psyr_2439	0.14	+2.2
2,824,070	+		Psyr_2439	0.14	-1.3
2,824,070	+		Psyr_2439	0.14	-0.7
2,824,070	+		Psyr_2439	0.14	+1.6
2,824,070	+		Psyr_2439	0.14	-0.3
2,824,071	-		Psyr_2439	0.14	-0.4
2,824,071	-		Psyr_2439	0.14	-1.6
2,824,071	-		Psyr_2439	0.14	+0.4
2,824,071	-		Psyr_2439	0.14	+0.4
2,824,071	-		Psyr_2439	0.14	-0.9
2,824,703	+		Psyr_2439	0.82	-0.6
2,824,721	+		Psyr_2439	0.84	+0.1
2,824,721	+		Psyr_2439	0.84	+0.2
2,824,721	+		Psyr_2439	0.84	+1.0
2,824,721	+		Psyr_2439	0.84	+0.1
2,824,722	-		Psyr_2439	0.84	+0.7
2,824,722	-		Psyr_2439	0.84	+0.4
2,824,866	+				+0.4
2,824,866	+				+0.2