Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2247

Experiment: KB with Trimethoprim 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Trimethoprim 125 ug/ml
2,612,572	+		Psyr_2246	0.60	+0.3
2,612,944	-		Psyr_2246	0.79	+0.4
2,612,944	-		Psyr_2246	0.79	+1.6
2,612,944	-		Psyr_2246	0.79	+1.2
2,613,455	-				-0.6
2,613,578	+				-1.9
2,613,578	+				-0.6
2,613,578	+				+1.0
2,613,578	+				+0.2
2,613,578	+				+0.1
2,613,579	-				-1.4
2,613,579	-				-0.4
2,613,636	+				+1.6
2,613,638	+				-0.1
2,613,638	+				+1.7
2,613,638	+				+0.9
2,613,827	-		Psyr_2247	0.32	-0.1
2,613,828	+		Psyr_2247	0.32	+0.0
2,613,828	+		Psyr_2247	0.32	-0.7
2,613,829	-		Psyr_2247	0.32	-1.9
2,613,829	-		Psyr_2247	0.32	-0.1
2,613,829	-		Psyr_2247	0.32	-1.6
2,614,899	+		Psyr_2248	0.46	-1.1
2,614,899	+		Psyr_2248	0.46	-1.1
2,614,900	-		Psyr_2248	0.46	-0.1
2,614,914	+		Psyr_2248	0.47	+0.2
2,614,917	+		Psyr_2248	0.47	-1.0
2,614,917	+		Psyr_2248	0.47	+0.6
2,614,918	-		Psyr_2248	0.48	-0.9
2,614,918	-		Psyr_2248	0.48	+0.1
2,614,918	-		Psyr_2248	0.48	+0.0
2,615,194	-		Psyr_2248	0.75	+0.4