Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1907

Experiment: KB with Trimethoprim 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Trimethoprim 125 ug/ml
2,182,661	+				+0.2
2,182,745	+		Psyr_1907	0.14	-2.3
2,182,746	-		Psyr_1907	0.14	+0.1
2,182,746	-		Psyr_1907	0.14	-2.7
2,182,757	+		Psyr_1907	0.15	-2.1
2,182,758	-		Psyr_1907	0.16	-1.9
2,182,758	-		Psyr_1907	0.16	-0.3
2,182,758	-		Psyr_1907	0.16	-1.7
2,183,283	+		Psyr_1907	0.73	-1.8
2,183,334	-		Psyr_1907	0.78	-1.5
2,183,528	+				+0.7
2,183,600	-				+0.9
2,183,610	-				+1.0
2,183,968	+				+1.4
2,183,968	+				+0.1
2,183,968	+				+0.0
2,183,969	-				-1.1
2,183,969	-				-1.1
2,183,969	-				+0.2
2,183,999	+				-0.3
2,183,999	+				-0.1
2,184,000	-				+1.9
2,184,023	+				-0.3
2,184,024	-				+0.3
2,184,024	-				-0.9
2,184,051	+				-0.1
2,184,052	-				-0.6
2,184,052	-				+0.3
2,184,052	-				+0.1
2,184,052	-				+0.4
2,184,052	-				-0.3
2,184,052	-				-2.1
2,184,317	+		Psyr_1909	0.43	-0.3