Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1783

Experiment: KB with Trimethoprim 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Trimethoprim 125 ug/ml
2,032,033	+				-0.6
2,032,034	-				+0.9
2,032,284	+				-0.3
2,032,291	+				+0.6
2,032,291	+				+1.5
2,032,292	-				+1.7
2,032,292	-				+1.9
2,032,292	-				+0.7
2,032,546	-		Psyr_1782	0.86	+0.1
2,032,603	+				-0.6
2,032,603	+				+0.7
2,032,604	-				+0.4
2,032,604	-				-0.7
2,033,010	+		Psyr_1783	0.27	-0.9
2,033,101	+		Psyr_1783	0.63	+0.7
2,033,102	-		Psyr_1783	0.64	-0.9
2,033,130	+		Psyr_1783	0.75	+0.7
2,033,130	+		Psyr_1783	0.75	-0.5
2,033,131	-		Psyr_1783	0.75	-1.8
2,033,131	-		Psyr_1783	0.75	-1.2
2,033,131	-		Psyr_1783	0.75	+0.7
2,033,190	+				-0.1
2,033,258	+				+0.3
2,033,259	-				-0.9
2,033,277	-				-0.6
2,033,277	-				+0.1
2,033,339	+				-0.2
2,033,340	-				+0.5
2,033,342	+				-0.3
2,033,342	+				+0.1
2,033,343	-				-0.3
2,033,343	-				+0.7
2,033,343	-				-1.1
2,033,356	+				-1.3
2,033,356	+				+0.0
2,033,357	-				-0.4
2,033,430	-				+1.3
2,033,430	-				-0.2
2,033,480	+		Psyr_1784	0.11	+0.7
2,033,480	+		Psyr_1784	0.11	-0.2
2,033,480	+		Psyr_1784	0.11	+0.4
2,033,480	+		Psyr_1784	0.11	+0.7
2,033,480	+		Psyr_1784	0.11	+1.7
2,033,481	-		Psyr_1784	0.11	+1.2
2,033,481	-		Psyr_1784	0.11	+0.7
2,033,546	+		Psyr_1784	0.14	-0.6
2,033,630	+		Psyr_1784	0.18	-0.9
2,033,630	+		Psyr_1784	0.18	-0.4
2,033,630	+		Psyr_1784	0.18	+0.2
2,033,645	+		Psyr_1784	0.18	+0.8
2,033,719	+		Psyr_1784	0.22	+1.7
2,033,843	+		Psyr_1784	0.28	+0.7
2,033,843	+		Psyr_1784	0.28	-1.6
2,033,844	-		Psyr_1784	0.28	+0.7
2,033,867	+		Psyr_1784	0.29	+0.1
2,033,868	-		Psyr_1784	0.29	-1.0
2,033,868	-		Psyr_1784	0.29	+0.1
2,033,942	+		Psyr_1784	0.32	+0.7
2,033,942	+		Psyr_1784	0.32	-0.3
2,033,952	-		Psyr_1784	0.33	-2.1
2,033,952	-		Psyr_1784	0.33	+0.1
2,033,976	+		Psyr_1784	0.34	-0.6
2,033,976	+		Psyr_1784	0.34	+0.5
2,033,977	-		Psyr_1784	0.34	+3.3
2,033,978	+		Psyr_1784	0.34	+0.4
2,033,978	+		Psyr_1784	0.34	+0.9
2,033,978	+		Psyr_1784	0.34	-1.0
2,033,978	+		Psyr_1784	0.34	-1.5
2,033,978	+		Psyr_1784	0.34	-0.8
2,033,978	+		Psyr_1784	0.34	+0.3
2,033,979	-		Psyr_1784	0.34	+0.2
2,034,006	+		Psyr_1784	0.35	+0.9
2,034,020	+		Psyr_1784	0.36	-0.6
2,034,020	+		Psyr_1784	0.36	-1.8
2,034,020	+		Psyr_1784	0.36	+1.0
2,034,021	-		Psyr_1784	0.36	-0.4
2,034,021	-		Psyr_1784	0.36	+1.2
2,034,021	-		Psyr_1784	0.36	-0.0
2,034,048	-		Psyr_1784	0.37	+0.0
2,034,054	-		Psyr_1784	0.37	+1.2
2,034,119	+		Psyr_1784	0.40	-2.1
2,034,120	-		Psyr_1784	0.40	+0.2