Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS08425

Experiment: R2A with Aluminum chloride 3.125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Aluminum chloride 3.125 mM
1,835,367	+		LRK54_RS08420	0.54	-0.9
1,835,367	+		LRK54_RS08420	0.54	+0.2
1,835,367	+		LRK54_RS08420	0.54	-1.6
1,835,367	+		LRK54_RS08420	0.54	+0.7
1,835,367	+		LRK54_RS08420	0.54	+0.2
1,835,367	+		LRK54_RS08420	0.54	+0.4
1,835,367	+		LRK54_RS08420	0.54	+0.7
1,835,367	+		LRK54_RS08420	0.54	+0.1
1,835,367	+		LRK54_RS08420	0.54	-2.3
1,835,368	-		LRK54_RS08420	0.54	+0.9
1,835,368	-		LRK54_RS08420	0.54	-0.0
1,835,368	-		LRK54_RS08420	0.54	+0.8
1,835,368	-		LRK54_RS08420	0.54	+1.1
1,835,368	-		LRK54_RS08420	0.54	+0.3
1,835,368	-		LRK54_RS08420	0.54	+0.3
1,835,496	+		LRK54_RS08420	0.61	-1.8
1,835,496	+		LRK54_RS08420	0.61	-0.9
1,835,496	+		LRK54_RS08420	0.61	-0.1
1,835,496	+		LRK54_RS08420	0.61	+0.4
1,835,496	+		LRK54_RS08420	0.61	-1.7
1,835,496	+		LRK54_RS08420	0.61	+1.2
1,835,496	+		LRK54_RS08420	0.61	-0.3
1,835,496	+		LRK54_RS08420	0.61	-0.6
1,835,496	+		LRK54_RS08420	0.61	+0.3
1,835,496	+		LRK54_RS08420	0.61	-1.2
1,835,496	+		LRK54_RS08420	0.61	+0.9
1,835,496	+		LRK54_RS08420	0.61	-0.4
1,835,497	-		LRK54_RS08420	0.61	-0.7
1,835,497	-		LRK54_RS08420	0.61	-0.4
1,835,497	-		LRK54_RS08420	0.61	+0.9
1,835,497	-		LRK54_RS08420	0.61	-2.2
1,835,497	-		LRK54_RS08420	0.61	+0.4
1,835,497	-		LRK54_RS08420	0.61	+0.0
1,835,497	-		LRK54_RS08420	0.61	+0.4
1,835,497	-		LRK54_RS08420	0.61	-0.1
1,835,497	-		LRK54_RS08420	0.61	+0.3
1,835,497	-		LRK54_RS08420	0.61	-0.0
1,835,497	-		LRK54_RS08420	0.61	-0.1
1,835,497	-		LRK54_RS08420	0.61	+0.5
1,835,500	-		LRK54_RS08420	0.61	+0.2
1,835,500	-		LRK54_RS08420	0.61	-0.4
1,835,500	-		LRK54_RS08420	0.61	-0.5
1,835,736	+		LRK54_RS08420	0.73	-0.3
1,835,736	+		LRK54_RS08420	0.73	+0.4
1,835,736	+		LRK54_RS08420	0.73	-0.7
1,835,736	+		LRK54_RS08420	0.73	+0.3
1,835,736	+		LRK54_RS08420	0.73	-1.4
1,835,736	+		LRK54_RS08420	0.73	+0.4
1,835,736	+		LRK54_RS08420	0.73	-0.7
1,835,736	+		LRK54_RS08420	0.73	-0.1
1,835,736	+		LRK54_RS08420	0.73	+1.4
1,835,736	+		LRK54_RS08420	0.73	-1.3
1,835,736	+		LRK54_RS08420	0.73	+0.1
1,835,736	+		LRK54_RS08420	0.73	+0.5
1,835,736	+		LRK54_RS08420	0.73	+0.8
1,835,737	-		LRK54_RS08420	0.73	+0.3
1,835,737	-		LRK54_RS08420	0.73	-1.0
1,835,737	-		LRK54_RS08420	0.73	-0.2
1,835,737	-		LRK54_RS08420	0.73	-0.6
1,835,737	-		LRK54_RS08420	0.73	+0.6
1,835,737	-		LRK54_RS08420	0.73	+0.4
1,835,737	-		LRK54_RS08420	0.73	+0.0
1,835,737	-		LRK54_RS08420	0.73	-0.1
1,835,737	-		LRK54_RS08420	0.73	-0.2
1,835,737	-		LRK54_RS08420	0.73	-0.0
1,835,766	+		LRK54_RS08420	0.75	-1.0
1,835,766	+		LRK54_RS08420	0.75	-0.0
1,835,766	+		LRK54_RS08420	0.75	-0.3
1,835,766	+		LRK54_RS08420	0.75	-0.2
1,835,766	+		LRK54_RS08420	0.75	+1.8
1,835,766	+		LRK54_RS08420	0.75	-1.0
1,835,766	+		LRK54_RS08420	0.75	-0.0
1,835,766	+		LRK54_RS08420	0.75	+1.0
1,835,766	+		LRK54_RS08420	0.75	+0.5
1,835,766	+		LRK54_RS08420	0.75	+0.3
1,835,767	-		LRK54_RS08420	0.75	+0.3
1,835,767	-		LRK54_RS08420	0.75	-0.4
1,835,767	-		LRK54_RS08420	0.75	+0.3
1,835,767	-		LRK54_RS08420	0.75	+0.0
1,835,767	-		LRK54_RS08420	0.75	+1.1
1,835,790	+		LRK54_RS08420	0.76	-0.4
1,835,790	+		LRK54_RS08420	0.76	+1.7
1,835,790	+		LRK54_RS08420	0.76	+0.6
1,835,790	+		LRK54_RS08420	0.76	+0.2
1,835,790	+		LRK54_RS08420	0.76	+0.8
1,835,790	+		LRK54_RS08420	0.76	-0.8
1,835,790	+		LRK54_RS08420	0.76	+0.8
1,835,790	+		LRK54_RS08420	0.76	-0.4
1,835,790	+		LRK54_RS08420	0.76	-0.5
1,835,790	+		LRK54_RS08420	0.76	-1.4
1,835,790	+		LRK54_RS08420	0.76	+0.7
1,835,790	+		LRK54_RS08420	0.76	+0.5
1,835,790	+		LRK54_RS08420	0.76	-0.2
1,835,790	+		LRK54_RS08420	0.76	+0.5
1,835,790	+		LRK54_RS08420	0.76	-0.6
1,835,790	+		LRK54_RS08420	0.76	+0.4
1,835,790	+		LRK54_RS08420	0.76	-0.1
1,835,790	+		LRK54_RS08420	0.76	-0.1
1,835,790	+		LRK54_RS08420	0.76	-0.3
1,835,791	-		LRK54_RS08420	0.76	+0.4
1,835,791	-		LRK54_RS08420	0.76	+0.2
1,835,791	-		LRK54_RS08420	0.76	-0.1
1,835,791	-		LRK54_RS08420	0.76	+1.8
1,835,791	-		LRK54_RS08420	0.76	+0.8
1,835,791	-		LRK54_RS08420	0.76	+0.9
1,835,791	-		LRK54_RS08420	0.76	-0.8
1,835,791	-		LRK54_RS08420	0.76	+0.5
1,835,791	-		LRK54_RS08420	0.76	-0.7
1,835,791	-		LRK54_RS08420	0.76	-0.3
1,835,791	-		LRK54_RS08420	0.76	-0.1
1,835,791	-		LRK54_RS08420	0.76	-0.8
1,835,791	-		LRK54_RS08420	0.76	+0.2
1,835,791	-		LRK54_RS08420	0.76	-0.4
1,835,791	-		LRK54_RS08420	0.76	+0.4
1,835,791	-		LRK54_RS08420	0.76	-0.0
1,835,791	-		LRK54_RS08420	0.76	+0.7
1,835,791	-		LRK54_RS08420	0.76	+0.6
1,835,791	-		LRK54_RS08420	0.76	+0.6
1,835,791	-		LRK54_RS08420	0.76	+0.1
1,835,791	-		LRK54_RS08420	0.76	-0.3
1,835,791	-		LRK54_RS08420	0.76	-0.2
1,835,791	-		LRK54_RS08420	0.76	-0.3
1,835,791	-		LRK54_RS08420	0.76	+0.5
1,835,791	-		LRK54_RS08420	0.76	+0.5
1,835,791	-		LRK54_RS08420	0.76	+0.6
1,835,791	-		LRK54_RS08420	0.76	+0.8
1,835,791	-		LRK54_RS08420	0.76	+0.0
1,835,791	-		LRK54_RS08420	0.76	+0.0
1,835,791	-		LRK54_RS08420	0.76	-0.4
1,835,791	-		LRK54_RS08420	0.76	+0.3
1,835,791	-		LRK54_RS08420	0.76	+0.1
1,835,791	-		LRK54_RS08420	0.76	-0.1
1,835,829	+		LRK54_RS08420	0.78	+0.5
1,835,829	+		LRK54_RS08420	0.78	-0.4
1,835,829	+		LRK54_RS08420	0.78	-0.9
1,835,829	+		LRK54_RS08420	0.78	+0.6
1,835,830	-		LRK54_RS08420	0.78	+0.5
1,835,830	-		LRK54_RS08420	0.78	+0.3
1,835,830	-		LRK54_RS08420	0.78	-1.5
1,835,830	-		LRK54_RS08420	0.78	-0.4
1,835,830	-		LRK54_RS08420	0.78	+0.1
1,835,832	+		LRK54_RS08420	0.78	-1.1
1,835,832	+		LRK54_RS08420	0.78	+0.3
1,835,832	+		LRK54_RS08420	0.78	+0.0
1,835,832	+		LRK54_RS08420	0.78	-2.4
1,835,832	+		LRK54_RS08420	0.78	-0.1
1,835,832	+		LRK54_RS08420	0.78	+0.5
1,835,832	+		LRK54_RS08420	0.78	+0.2
1,835,832	+		LRK54_RS08420	0.78	-2.1
1,835,832	+		LRK54_RS08420	0.78	+0.0
1,835,832	+		LRK54_RS08420	0.78	+0.3
1,835,832	+		LRK54_RS08420	0.78	-0.5
1,835,833	-		LRK54_RS08420	0.78	+0.3
1,835,833	-		LRK54_RS08420	0.78	+0.3
1,835,833	-		LRK54_RS08420	0.78	+0.1
1,835,833	-		LRK54_RS08420	0.78	-0.9
1,835,833	-		LRK54_RS08420	0.78	-0.1
1,835,833	-		LRK54_RS08420	0.78	-0.8
1,835,833	-		LRK54_RS08420	0.78	-0.0
1,835,833	-		LRK54_RS08420	0.78	+0.4
1,835,833	-		LRK54_RS08420	0.78	+0.5
1,835,833	-		LRK54_RS08420	0.78	+0.3
1,835,833	-		LRK54_RS08420	0.78	+1.7
1,835,982	+		LRK54_RS08420	0.86	+0.7
1,835,982	+		LRK54_RS08420	0.86	+2.7
1,835,982	+		LRK54_RS08420	0.86	-1.1
1,835,982	+		LRK54_RS08420	0.86	+0.0
1,835,982	+		LRK54_RS08420	0.86	+0.6
1,835,982	+		LRK54_RS08420	0.86	+0.1
1,835,982	+		LRK54_RS08420	0.86	+0.1
1,835,982	+		LRK54_RS08420	0.86	-0.1
1,835,982	+		LRK54_RS08420	0.86	+1.2
1,835,982	+		LRK54_RS08420	0.86	+0.3
1,835,982	+		LRK54_RS08420	0.86	-1.3
1,835,982	+		LRK54_RS08420	0.86	+0.4
1,835,982	+		LRK54_RS08420	0.86	-2.9
1,835,982	+		LRK54_RS08420	0.86	-0.6
1,835,982	+		LRK54_RS08420	0.86	+1.0
1,835,982	+		LRK54_RS08420	0.86	-1.0
1,835,982	+		LRK54_RS08420	0.86	-0.4
1,835,982	+		LRK54_RS08420	0.86	+0.6
1,835,982	+		LRK54_RS08420	0.86	-0.8
1,835,982	+		LRK54_RS08420	0.86	+0.5
1,835,982	+		LRK54_RS08420	0.86	-0.6
1,835,982	+		LRK54_RS08420	0.86	-0.4
1,835,982	+		LRK54_RS08420	0.86	-1.0
1,835,982	+		LRK54_RS08420	0.86	+0.4
1,835,982	+		LRK54_RS08420	0.86	-0.6
1,835,982	+		LRK54_RS08420	0.86	+0.1
1,835,982	+		LRK54_RS08420	0.86	+0.8
1,835,982	+		LRK54_RS08420	0.86	+0.8
1,835,982	+		LRK54_RS08420	0.86	-0.6
1,835,982	+		LRK54_RS08420	0.86	+0.4
1,835,982	+		LRK54_RS08420	0.86	+0.6
1,835,982	+		LRK54_RS08420	0.86	-0.3
1,835,982	+		LRK54_RS08420	0.86	+1.9
1,835,982	+		LRK54_RS08420	0.86	-0.3
1,835,982	+		LRK54_RS08420	0.86	-0.4
1,835,982	+		LRK54_RS08420	0.86	-0.1
1,835,982	+		LRK54_RS08420	0.86	-0.0
1,835,982	+		LRK54_RS08420	0.86	-0.2
1,835,982	+		LRK54_RS08420	0.86	-1.4
1,835,982	+		LRK54_RS08420	0.86	-1.3
1,835,982	+		LRK54_RS08420	0.86	+1.7
1,835,982	+		LRK54_RS08420	0.86	+0.1
1,835,982	+		LRK54_RS08420	0.86	-1.1
1,835,982	+		LRK54_RS08420	0.86	+1.3
1,835,982	+		LRK54_RS08420	0.86	+0.4
1,835,982	+		LRK54_RS08420	0.86	+0.1
1,835,982	+		LRK54_RS08420	0.86	-0.8
1,835,983	-		LRK54_RS08420	0.86	-0.0
1,835,983	-		LRK54_RS08420	0.86	+0.1
1,835,983	-		LRK54_RS08420	0.86	+0.1
1,835,983	-		LRK54_RS08420	0.86	+0.1
1,835,983	-		LRK54_RS08420	0.86	+1.2
1,835,983	-		LRK54_RS08420	0.86	+0.5
1,835,983	-		LRK54_RS08420	0.86	+0.1
1,835,983	-		LRK54_RS08420	0.86	+1.9
1,835,983	-		LRK54_RS08420	0.86	+0.0
1,835,983	-		LRK54_RS08420	0.86	-0.9
1,835,983	-		LRK54_RS08420	0.86	+1.3
1,835,983	-		LRK54_RS08420	0.86	-0.2
1,835,983	-		LRK54_RS08420	0.86	+0.5
1,835,983	-		LRK54_RS08420	0.86	+0.7
1,835,983	-		LRK54_RS08420	0.86	+0.4
1,835,983	-		LRK54_RS08420	0.86	-0.5
1,835,983	-		LRK54_RS08420	0.86	-0.8
1,835,983	-		LRK54_RS08420	0.86	+0.5
1,835,983	-		LRK54_RS08420	0.86	+0.6
1,835,983	-		LRK54_RS08420	0.86	-0.3
1,835,983	-		LRK54_RS08420	0.86	-0.2
1,835,983	-		LRK54_RS08420	0.86	-0.8
1,835,983	-		LRK54_RS08420	0.86	-0.3
1,835,983	-		LRK54_RS08420	0.86	+0.7
1,835,983	-		LRK54_RS08420	0.86	-0.2
1,835,983	-		LRK54_RS08420	0.86	+1.0
1,835,983	-		LRK54_RS08420	0.86	+0.1
1,835,983	-		LRK54_RS08420	0.86	-1.0
1,835,983	-		LRK54_RS08420	0.86	+0.3
1,835,988	+		LRK54_RS08420	0.86	+0.3
1,835,988	+		LRK54_RS08420	0.86	+0.6
1,835,988	+		LRK54_RS08420	0.86	-0.2
1,835,988	+		LRK54_RS08420	0.86	-0.4
1,835,988	+		LRK54_RS08420	0.86	-2.1
1,835,988	+		LRK54_RS08420	0.86	-0.1
1,835,988	+		LRK54_RS08420	0.86	+0.8
1,835,988	+		LRK54_RS08420	0.86	+0.2
1,835,988	+		LRK54_RS08420	0.86	-0.4
1,835,988	+		LRK54_RS08420	0.86	+0.4
1,835,988	+		LRK54_RS08420	0.86	-0.4
1,835,988	+		LRK54_RS08420	0.86	-0.3
1,835,988	+		LRK54_RS08420	0.86	-0.1
1,835,988	+		LRK54_RS08420	0.86	-1.0
1,835,988	+		LRK54_RS08420	0.86	-0.0
1,835,988	+		LRK54_RS08420	0.86	+0.3
1,835,988	+		LRK54_RS08420	0.86	-1.7
1,835,988	+		LRK54_RS08420	0.86	+0.1
1,835,988	+		LRK54_RS08420	0.86	+0.8
1,835,988	+		LRK54_RS08420	0.86	-0.8
1,835,988	+		LRK54_RS08420	0.86	-1.2
1,835,988	+		LRK54_RS08420	0.86	-2.1
1,835,988	+		LRK54_RS08420	0.86	-0.8
1,835,988	+		LRK54_RS08420	0.86	-0.8
1,835,988	+		LRK54_RS08420	0.86	-0.3
1,835,988	+		LRK54_RS08420	0.86	-0.6
1,835,988	+		LRK54_RS08420	0.86	+1.7
1,835,988	+		LRK54_RS08420	0.86	-1.3
1,835,988	+		LRK54_RS08420	0.86	+1.0
1,835,988	+		LRK54_RS08420	0.86	-0.2
1,835,988	+		LRK54_RS08420	0.86	-1.5
1,835,988	+		LRK54_RS08420	0.86	+0.0
1,835,988	+		LRK54_RS08420	0.86	-2.3
1,835,988	+		LRK54_RS08420	0.86	+1.0
1,835,989	-		LRK54_RS08420	0.86	-0.3
1,835,989	-		LRK54_RS08420	0.86	+1.3
1,835,989	-		LRK54_RS08420	0.86	+1.4
1,835,989	-		LRK54_RS08420	0.86	+0.1
1,835,989	-		LRK54_RS08420	0.86	-0.1
1,835,989	-		LRK54_RS08420	0.86	-0.5
1,835,989	-		LRK54_RS08420	0.86	-0.6
1,835,989	-		LRK54_RS08420	0.86	+0.1
1,835,989	-		LRK54_RS08420	0.86	-1.6
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