Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06208 and H281DRAFT_06209 are separated by 40 nucleotides H281DRAFT_06209 and H281DRAFT_06210 overlap by 4 nucleotides H281DRAFT_06210 and H281DRAFT_06211 are separated by 146 nucleotides
H281DRAFT_06208: H281DRAFT_06208 - Sugar phosphate permease, at 100,578 to 101,780
_06208
H281DRAFT_06209: H281DRAFT_06209 - carboxyvinyl-carboxyphosphonate phosphorylmutase, at 101,821 to 102,693
_06209
H281DRAFT_06210: H281DRAFT_06210 - aconitate hydratase, at 102,690 to 105,386
_06210
H281DRAFT_06211: H281DRAFT_06211 - transcriptional regulator, propionate catabolism operon regulatory protein, at 105,533 to 107,440
_06211
Position (kb) 102
103
104
105
106 Strain fitness (log2 ratio) -1
0
1
2 at 101.713 kb on - strand at 101.775 kb on - strand at 101.855 kb on + strand at 101.856 kb on - strand at 101.920 kb on + strand, within H281DRAFT_06209 at 101.920 kb on + strand, within H281DRAFT_06209 at 101.921 kb on - strand, within H281DRAFT_06209 at 101.970 kb on + strand, within H281DRAFT_06209 at 101.970 kb on + strand, within H281DRAFT_06209 at 101.971 kb on - strand, within H281DRAFT_06209 at 101.971 kb on - strand, within H281DRAFT_06209 at 102.041 kb on - strand, within H281DRAFT_06209 at 102.298 kb on + strand, within H281DRAFT_06209 at 102.453 kb on + strand, within H281DRAFT_06209 at 102.454 kb on - strand, within H281DRAFT_06209 at 102.454 kb on - strand, within H281DRAFT_06209 at 102.484 kb on - strand, within H281DRAFT_06209 at 102.540 kb on - strand, within H281DRAFT_06209 at 102.540 kb on - strand, within H281DRAFT_06209 at 102.543 kb on + strand, within H281DRAFT_06209 at 102.750 kb on + strand at 103.397 kb on + strand, within H281DRAFT_06210 at 103.397 kb on + strand, within H281DRAFT_06210 at 103.397 kb on + strand at 103.398 kb on - strand, within H281DRAFT_06210 at 103.398 kb on - strand, within H281DRAFT_06210 at 103.398 kb on - strand, within H281DRAFT_06210 at 103.398 kb on - strand, within H281DRAFT_06210 at 103.427 kb on + strand, within H281DRAFT_06210 at 103.428 kb on - strand, within H281DRAFT_06210 at 103.451 kb on + strand, within H281DRAFT_06210 at 103.452 kb on - strand, within H281DRAFT_06210 at 103.455 kb on - strand, within H281DRAFT_06210 at 103.513 kb on + strand, within H281DRAFT_06210 at 103.600 kb on + strand, within H281DRAFT_06210 at 103.601 kb on - strand, within H281DRAFT_06210 at 103.601 kb on - strand, within H281DRAFT_06210 at 103.601 kb on - strand, within H281DRAFT_06210 at 104.308 kb on + strand, within H281DRAFT_06210 at 104.309 kb on - strand, within H281DRAFT_06210 at 104.313 kb on + strand, within H281DRAFT_06210 at 104.314 kb on - strand, within H281DRAFT_06210 at 104.314 kb on - strand, within H281DRAFT_06210 at 104.316 kb on - strand, within H281DRAFT_06210 at 104.316 kb on - strand, within H281DRAFT_06210 at 104.603 kb on + strand, within H281DRAFT_06210 at 104.604 kb on - strand, within H281DRAFT_06210 at 104.610 kb on - strand, within H281DRAFT_06210 at 104.610 kb on - strand, within H281DRAFT_06210 at 104.658 kb on + strand, within H281DRAFT_06210 at 104.661 kb on + strand, within H281DRAFT_06210 at 105.398 kb on + strand at 105.417 kb on + strand at 105.418 kb on - strand at 105.453 kb on + strand at 105.454 kb on - strand at 105.471 kb on - strand at 105.493 kb on + strand at 105.493 kb on + strand at 105.547 kb on + strand at 105.547 kb on + strand at 105.574 kb on + strand at 105.620 kb on + strand at 105.641 kb on + strand at 105.642 kb on - strand at 105.642 kb on - strand at 105.660 kb on + strand at 105.660 kb on + strand at 105.660 kb on + strand at 105.660 kb on + strand at 105.660 kb on + strand at 105.660 kb on + strand at 105.660 kb on + strand at 105.660 kb on + strand at 105.661 kb on - strand at 105.661 kb on - strand at 105.661 kb on - strand at 105.761 kb on + strand, within H281DRAFT_06211 at 105.761 kb on + strand, within H281DRAFT_06211 at 105.762 kb on - strand, within H281DRAFT_06211 at 105.762 kb on - strand, within H281DRAFT_06211 at 105.762 kb on - strand, within H281DRAFT_06211 at 105.762 kb on - strand, within H281DRAFT_06211 at 105.762 kb on - strand, within H281DRAFT_06211 at 105.762 kb on - strand, within H281DRAFT_06211 at 105.762 kb on - strand, within H281DRAFT_06211 at 105.795 kb on + strand, within H281DRAFT_06211 at 106.363 kb on + strand, within H281DRAFT_06211 at 106.363 kb on + strand, within H281DRAFT_06211 at 106.364 kb on - strand, within H281DRAFT_06211 at 106.364 kb on - strand, within H281DRAFT_06211 at 106.364 kb on - strand, within H281DRAFT_06211 at 106.364 kb on - strand, within H281DRAFT_06211 at 106.367 kb on + strand, within H281DRAFT_06211 at 106.367 kb on + strand, within H281DRAFT_06211 at 106.367 kb on + strand, within H281DRAFT_06211 at 106.368 kb on - strand, within H281DRAFT_06211 at 106.368 kb on - strand, within H281DRAFT_06211
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 101,713 - +0.2 101,775 - -0.3 101,855 + -0.4 101,856 - -0.6 101,920 + H281DRAFT_06209 0.11 +0.3 101,920 + H281DRAFT_06209 0.11 +0.5 101,921 - H281DRAFT_06209 0.11 -1.7 101,970 + H281DRAFT_06209 0.17 -0.5 101,970 + H281DRAFT_06209 0.17 +0.8 101,971 - H281DRAFT_06209 0.17 -0.8 101,971 - H281DRAFT_06209 0.17 -0.3 102,041 - H281DRAFT_06209 0.25 -0.6 102,298 + H281DRAFT_06209 0.55 -0.3 102,453 + H281DRAFT_06209 0.72 -0.5 102,454 - H281DRAFT_06209 0.73 -0.3 102,454 - H281DRAFT_06209 0.73 -0.5 102,484 - H281DRAFT_06209 0.76 -0.7 102,540 - H281DRAFT_06209 0.82 +1.6 102,540 - H281DRAFT_06209 0.82 +0.0 102,543 + H281DRAFT_06209 0.83 -1.0 102,750 + +0.3 103,397 + H281DRAFT_06210 0.26 +0.4 103,397 + H281DRAFT_06210 0.26 +0.0 103,397 + -0.4 103,398 - H281DRAFT_06210 0.26 +1.1 103,398 - H281DRAFT_06210 0.26 +0.2 103,398 - H281DRAFT_06210 0.26 +1.0 103,398 - H281DRAFT_06210 0.26 -0.6 103,427 + H281DRAFT_06210 0.27 +0.2 103,428 - H281DRAFT_06210 0.27 +0.2 103,451 + H281DRAFT_06210 0.28 +1.7 103,452 - H281DRAFT_06210 0.28 -0.2 103,455 - H281DRAFT_06210 0.28 -0.2 103,513 + H281DRAFT_06210 0.31 +0.9 103,600 + H281DRAFT_06210 0.34 -0.5 103,601 - H281DRAFT_06210 0.34 +0.2 103,601 - H281DRAFT_06210 0.34 +0.4 103,601 - H281DRAFT_06210 0.34 -0.0 104,308 + H281DRAFT_06210 0.60 +0.2 104,309 - H281DRAFT_06210 0.60 -0.2 104,313 + H281DRAFT_06210 0.60 -0.3 104,314 - H281DRAFT_06210 0.60 +0.3 104,314 - H281DRAFT_06210 0.60 +0.2 104,316 - H281DRAFT_06210 0.60 -0.7 104,316 - H281DRAFT_06210 0.60 +0.4 104,603 + H281DRAFT_06210 0.71 +0.1 104,604 - H281DRAFT_06210 0.71 +0.3 104,610 - H281DRAFT_06210 0.71 +0.3 104,610 - H281DRAFT_06210 0.71 +0.4 104,658 + H281DRAFT_06210 0.73 +1.1 104,661 + H281DRAFT_06210 0.73 +0.4 105,398 + +0.3 105,417 + +0.3 105,418 - +0.1 105,453 + +0.0 105,454 - -0.5 105,471 - -0.3 105,493 + +0.0 105,493 + +0.0 105,547 + -0.6 105,547 + +0.6 105,574 + +0.4 105,620 + -0.7 105,641 + -0.2 105,642 - +0.1 105,642 - +0.0 105,660 + -0.7 105,660 + +0.6 105,660 + -0.2 105,660 + +0.3 105,660 + +0.7 105,660 + +0.8 105,660 + -0.1 105,660 + +0.2 105,661 - -0.5 105,661 - +0.4 105,661 - -0.7 105,761 + H281DRAFT_06211 0.12 -0.6 105,761 + H281DRAFT_06211 0.12 -0.5 105,762 - H281DRAFT_06211 0.12 -0.2 105,762 - H281DRAFT_06211 0.12 -0.9 105,762 - H281DRAFT_06211 0.12 -0.4 105,762 - H281DRAFT_06211 0.12 -1.3 105,762 - H281DRAFT_06211 0.12 -1.6 105,762 - H281DRAFT_06211 0.12 -0.1 105,762 - H281DRAFT_06211 0.12 -0.3 105,795 + H281DRAFT_06211 0.14 -0.0 106,363 + H281DRAFT_06211 0.44 +0.9 106,363 + H281DRAFT_06211 0.44 +1.9 106,364 - H281DRAFT_06211 0.44 -0.2 106,364 - H281DRAFT_06211 0.44 +2.1 106,364 - H281DRAFT_06211 0.44 +0.1 106,364 - H281DRAFT_06211 0.44 -0.8 106,367 + H281DRAFT_06211 0.44 +0.6 106,367 + H281DRAFT_06211 0.44 +0.2 106,367 + H281DRAFT_06211 0.44 +0.1 106,368 - H281DRAFT_06211 0.44 +0.2 106,368 - H281DRAFT_06211 0.44 +0.7
Or see this region's nucleotide sequence