Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05935 and H281DRAFT_05936 are separated by 132 nucleotides H281DRAFT_05936 and H281DRAFT_05937 are separated by 477 nucleotides
H281DRAFT_05935: H281DRAFT_05935 - glutamine--fructose-6-phosphate transaminase, at 73,221 to 75,050
_05935
H281DRAFT_05936: H281DRAFT_05936 - hypothetical protein, at 75,183 to 76,709
_05936
H281DRAFT_05937: H281DRAFT_05937 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 77,187 to 77,927
_05937
Position (kb) 75
76
77 Strain fitness (log2 ratio) -1
0
1
2 at 74.241 kb on - strand, within H281DRAFT_05935 at 74.245 kb on + strand, within H281DRAFT_05935 at 74.699 kb on - strand, within H281DRAFT_05935 at 74.773 kb on + strand at 74.854 kb on - strand, within H281DRAFT_05935 at 74.905 kb on + strand at 75.193 kb on - strand at 75.474 kb on + strand, within H281DRAFT_05936 at 75.633 kb on + strand, within H281DRAFT_05936 at 75.790 kb on - strand, within H281DRAFT_05936 at 76.188 kb on + strand, within H281DRAFT_05936 at 76.614 kb on + strand at 77.132 kb on + strand at 77.133 kb on - strand at 77.270 kb on + strand, within H281DRAFT_05937 at 77.271 kb on - strand, within H281DRAFT_05937 at 77.272 kb on + strand, within H281DRAFT_05937 at 77.273 kb on - strand, within H281DRAFT_05937 at 77.276 kb on + strand, within H281DRAFT_05937 at 77.551 kb on - strand, within H281DRAFT_05937
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 74,241 - H281DRAFT_05935 0.56 +0.2 74,245 + H281DRAFT_05935 0.56 -0.1 74,699 - H281DRAFT_05935 0.81 +0.3 74,773 + -0.2 74,854 - H281DRAFT_05935 0.89 -0.3 74,905 + -1.1 75,193 - +0.6 75,474 + H281DRAFT_05936 0.19 +0.0 75,633 + H281DRAFT_05936 0.29 -0.2 75,790 - H281DRAFT_05936 0.40 -0.4 76,188 + H281DRAFT_05936 0.66 +0.3 76,614 + +1.8 77,132 + -1.0 77,133 - -0.2 77,270 + H281DRAFT_05937 0.11 -1.3 77,271 - H281DRAFT_05937 0.11 +1.2 77,272 + H281DRAFT_05937 0.11 +0.3 77,273 - H281DRAFT_05937 0.12 -0.2 77,276 + H281DRAFT_05937 0.12 -0.5 77,551 - H281DRAFT_05937 0.49 +0.1
Or see this region's nucleotide sequence