Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05734 and H281DRAFT_05735 are separated by 294 nucleotides H281DRAFT_05735 and H281DRAFT_05736 are separated by 313 nucleotides
H281DRAFT_05734: H281DRAFT_05734 - aquaporin Z, at 6,774 to 7,514
_05734
H281DRAFT_05735: H281DRAFT_05735 - DNA-binding protein H-NS, at 7,809 to 8,111
_05735
H281DRAFT_05736: H281DRAFT_05736 - Glycosyltransferase involved in cell wall bisynthesis, at 8,425 to 9,489
_05736
Position (kb) 7
8
9 Strain fitness (log2 ratio) -2
-1
0
1 at 6.830 kb on - strand at 7.007 kb on + strand, within H281DRAFT_05734 at 7.008 kb on - strand, within H281DRAFT_05734 at 7.076 kb on + strand, within H281DRAFT_05734 at 7.076 kb on + strand, within H281DRAFT_05734 at 7.246 kb on + strand, within H281DRAFT_05734 at 7.247 kb on - strand, within H281DRAFT_05734 at 7.343 kb on - strand, within H281DRAFT_05734 at 7.343 kb on - strand, within H281DRAFT_05734 at 7.381 kb on - strand, within H281DRAFT_05734 at 7.381 kb on - strand, within H281DRAFT_05734 at 7.703 kb on + strand at 7.725 kb on + strand at 7.763 kb on - strand at 7.791 kb on + strand at 8.007 kb on - strand, within H281DRAFT_05735 at 8.010 kb on + strand, within H281DRAFT_05735 at 8.030 kb on + strand, within H281DRAFT_05735 at 8.030 kb on + strand, within H281DRAFT_05735 at 8.033 kb on + strand, within H281DRAFT_05735 at 8.034 kb on - strand, within H281DRAFT_05735 at 8.034 kb on - strand, within H281DRAFT_05735 at 8.165 kb on - strand at 8.365 kb on - strand at 8.365 kb on - strand at 8.484 kb on - strand at 8.495 kb on + strand at 8.495 kb on + strand at 8.496 kb on - strand at 8.608 kb on + strand, within H281DRAFT_05736 at 8.608 kb on + strand, within H281DRAFT_05736 at 8.609 kb on - strand at 8.613 kb on + strand, within H281DRAFT_05736 at 8.613 kb on + strand, within H281DRAFT_05736 at 8.614 kb on - strand, within H281DRAFT_05736 at 8.615 kb on + strand, within H281DRAFT_05736 at 8.616 kb on - strand, within H281DRAFT_05736 at 8.616 kb on - strand, within H281DRAFT_05736 at 8.849 kb on + strand, within H281DRAFT_05736 at 8.849 kb on + strand, within H281DRAFT_05736 at 8.849 kb on + strand, within H281DRAFT_05736 at 8.849 kb on + strand, within H281DRAFT_05736 at 8.850 kb on - strand, within H281DRAFT_05736 at 8.850 kb on - strand, within H281DRAFT_05736 at 8.970 kb on - strand, within H281DRAFT_05736 at 9.023 kb on + strand, within H281DRAFT_05736 at 9.023 kb on + strand, within H281DRAFT_05736 at 9.023 kb on + strand, within H281DRAFT_05736 at 9.023 kb on + strand, within H281DRAFT_05736 at 9.023 kb on + strand, within H281DRAFT_05736 at 9.024 kb on - strand, within H281DRAFT_05736
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 6,830 - -0.3 7,007 + H281DRAFT_05734 0.31 -0.5 7,008 - H281DRAFT_05734 0.32 -0.5 7,076 + H281DRAFT_05734 0.41 +0.1 7,076 + H281DRAFT_05734 0.41 +0.5 7,246 + H281DRAFT_05734 0.64 -0.3 7,247 - H281DRAFT_05734 0.64 -0.7 7,343 - H281DRAFT_05734 0.77 -1.0 7,343 - H281DRAFT_05734 0.77 -0.8 7,381 - H281DRAFT_05734 0.82 -0.0 7,381 - H281DRAFT_05734 0.82 +0.8 7,703 + +0.2 7,725 + +0.7 7,763 - -0.2 7,791 + +0.2 8,007 - H281DRAFT_05735 0.65 +0.1 8,010 + H281DRAFT_05735 0.66 -0.3 8,030 + H281DRAFT_05735 0.73 -0.4 8,030 + H281DRAFT_05735 0.73 -1.8 8,033 + H281DRAFT_05735 0.74 -0.1 8,034 - H281DRAFT_05735 0.74 -0.6 8,034 - H281DRAFT_05735 0.74 -1.9 8,165 - +0.7 8,365 - +0.4 8,365 - +0.1 8,484 - -1.1 8,495 + -0.2 8,495 + -0.0 8,496 - +0.0 8,608 + H281DRAFT_05736 0.17 +0.7 8,608 + H281DRAFT_05736 0.17 +0.2 8,609 - +0.2 8,613 + H281DRAFT_05736 0.18 -0.1 8,613 + H281DRAFT_05736 0.18 +0.0 8,614 - H281DRAFT_05736 0.18 -0.5 8,615 + H281DRAFT_05736 0.18 -0.1 8,616 - H281DRAFT_05736 0.18 -0.2 8,616 - H281DRAFT_05736 0.18 +0.2 8,849 + H281DRAFT_05736 0.40 -0.7 8,849 + H281DRAFT_05736 0.40 -0.0 8,849 + H281DRAFT_05736 0.40 -0.7 8,849 + H281DRAFT_05736 0.40 -1.7 8,850 - H281DRAFT_05736 0.40 -0.6 8,850 - H281DRAFT_05736 0.40 -0.2 8,970 - H281DRAFT_05736 0.51 +0.5 9,023 + H281DRAFT_05736 0.56 -0.4 9,023 + H281DRAFT_05736 0.56 +0.5 9,023 + H281DRAFT_05736 0.56 -0.5 9,023 + H281DRAFT_05736 0.56 +0.4 9,023 + H281DRAFT_05736 0.56 +0.7 9,024 - H281DRAFT_05736 0.56 -0.3
Or see this region's nucleotide sequence