Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_02626

Experiment: 2-Deoxy-D-Ribose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_02625 and H281DRAFT_02626 are separated by 243 nucleotidesH281DRAFT_02626 and H281DRAFT_02627 are separated by 147 nucleotides H281DRAFT_02625: H281DRAFT_02625 - amino acid ABC transporter substrate-binding protein, PAAT family, at 201,248 to 202,153 _02625 H281DRAFT_02626: H281DRAFT_02626 - hypothetical protein, at 202,397 to 203,149 _02626 H281DRAFT_02627: H281DRAFT_02627 - transcriptional regulator, LacI family, at 203,297 to 204,301 _02627 Position (kb) 202 203 204Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 201.421 kb on + strand, within H281DRAFT_02625at 201.422 kb on - strand, within H281DRAFT_02625at 201.552 kb on + strand, within H281DRAFT_02625at 201.552 kb on + strand, within H281DRAFT_02625at 201.553 kb on - strand, within H281DRAFT_02625at 201.553 kb on - strand, within H281DRAFT_02625at 201.614 kb on - strand, within H281DRAFT_02625at 201.617 kb on - strand, within H281DRAFT_02625at 201.689 kb on + strand, within H281DRAFT_02625at 201.986 kb on - strand, within H281DRAFT_02625at 202.153 kb on + strandat 202.153 kb on + strandat 202.154 kb on - strandat 202.179 kb on - strandat 202.306 kb on + strandat 202.307 kb on - strandat 202.649 kb on + strand, within H281DRAFT_02626at 202.650 kb on - strand, within H281DRAFT_02626at 203.127 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C)
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201,421 + H281DRAFT_02625 0.19 +2.9
201,422 - H281DRAFT_02625 0.19 +0.3
201,552 + H281DRAFT_02625 0.34 -2.8
201,552 + H281DRAFT_02625 0.34 -0.6
201,553 - H281DRAFT_02625 0.34 -2.1
201,553 - H281DRAFT_02625 0.34 +0.9
201,614 - H281DRAFT_02625 0.40 +0.1
201,617 - H281DRAFT_02625 0.41 +0.1
201,689 + H281DRAFT_02625 0.49 +0.2
201,986 - H281DRAFT_02625 0.81 -0.4
202,153 + +0.3
202,153 + +0.2
202,154 - +0.2
202,179 - +0.4
202,306 + -0.1
202,307 - +0.4
202,649 + H281DRAFT_02626 0.33 +0.3
202,650 - H281DRAFT_02626 0.34 +0.3
203,127 - +0.6

Or see this region's nucleotide sequence