Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01161 and H281DRAFT_01162 are separated by 476 nucleotides H281DRAFT_01162 and H281DRAFT_01163 are separated by 54 nucleotides H281DRAFT_01163 and H281DRAFT_01164 are separated by 83 nucleotides H281DRAFT_01164 and H281DRAFT_01165 are separated by 120 nucleotides
H281DRAFT_01161: H281DRAFT_01161 - cytochrome b561, at 1,310,730 to 1,311,284
_01161
H281DRAFT_01162: H281DRAFT_01162 - hypothetical protein, at 1,311,761 to 1,311,883
_01162
H281DRAFT_01163: H281DRAFT_01163 - hypothetical protein, at 1,311,938 to 1,312,306
_01163
H281DRAFT_01164: H281DRAFT_01164 - hypothetical protein, at 1,312,390 to 1,312,659
_01164
H281DRAFT_01165: H281DRAFT_01165 - hypothetical protein, at 1,312,780 to 1,313,031
_01165
Position (kb) 1311
1312 Strain fitness (log2 ratio) -1
0
1 at 1310.834 kb on - strand, within H281DRAFT_01161 at 1310.842 kb on - strand, within H281DRAFT_01161 at 1311.175 kb on - strand, within H281DRAFT_01161 at 1311.235 kb on + strand at 1311.346 kb on - strand at 1311.893 kb on - strand at 1311.918 kb on - strand at 1312.004 kb on - strand, within H281DRAFT_01163 at 1312.103 kb on + strand, within H281DRAFT_01163 at 1312.160 kb on + strand, within H281DRAFT_01163 at 1312.161 kb on - strand, within H281DRAFT_01163 at 1312.723 kb on - strand at 1312.821 kb on + strand, within H281DRAFT_01165 at 1312.882 kb on - strand, within H281DRAFT_01165
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 1,310,834 - H281DRAFT_01161 0.19 -0.4 1,310,842 - H281DRAFT_01161 0.20 -0.1 1,311,175 - H281DRAFT_01161 0.80 -1.6 1,311,235 + +0.3 1,311,346 - -0.1 1,311,893 - -0.0 1,311,918 - -0.4 1,312,004 - H281DRAFT_01163 0.18 +0.0 1,312,103 + H281DRAFT_01163 0.45 -1.1 1,312,160 + H281DRAFT_01163 0.60 -1.0 1,312,161 - H281DRAFT_01163 0.60 +0.4 1,312,723 - +0.7 1,312,821 + H281DRAFT_01165 0.16 +0.3 1,312,882 - H281DRAFT_01165 0.40 -0.0
Or see this region's nucleotide sequence