Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01123 and H281DRAFT_01124 are separated by 86 nucleotides H281DRAFT_01124 and H281DRAFT_01125 are separated by 66 nucleotides H281DRAFT_01125 and H281DRAFT_01126 overlap by 4 nucleotides H281DRAFT_01126 and H281DRAFT_01127 overlap by 4 nucleotides
H281DRAFT_01123: H281DRAFT_01123 - transcriptional regulator, LysR family, at 1,265,837 to 1,266,736
_01123
H281DRAFT_01124: H281DRAFT_01124 - hypothetical protein, at 1,266,823 to 1,267,077
_01124
H281DRAFT_01125: H281DRAFT_01125 - protein of unknown function (DUF2760), at 1,267,144 to 1,267,707
_01125
H281DRAFT_01126: H281DRAFT_01126 - Molecular chaperone DnaK (HSP70), at 1,267,704 to 1,269,563
_01126
H281DRAFT_01127: H281DRAFT_01127 - Molecular chaperone, at 1,269,560 to 1,272,529
_01127
Position (kb)
1267
1268
1269
1270 Strain fitness (log2 ratio)
-2
-1
0
1 at 1266.780 kb on + strand at 1266.836 kb on + strand at 1266.837 kb on - strand at 1266.978 kb on + strand, within H281DRAFT_01124 at 1267.144 kb on - strand at 1267.144 kb on - strand at 1267.489 kb on - strand, within H281DRAFT_01125 at 1267.600 kb on - strand, within H281DRAFT_01125 at 1267.704 kb on - strand at 1267.704 kb on - strand at 1267.878 kb on + strand at 1268.300 kb on + strand at 1268.301 kb on - strand, within H281DRAFT_01126 at 1268.301 kb on - strand, within H281DRAFT_01126 at 1268.571 kb on + strand, within H281DRAFT_01126 at 1268.571 kb on + strand, within H281DRAFT_01126 at 1268.571 kb on + strand, within H281DRAFT_01126 at 1268.571 kb on + strand, within H281DRAFT_01126 at 1268.571 kb on + strand, within H281DRAFT_01126 at 1268.572 kb on - strand, within H281DRAFT_01126 at 1268.572 kb on - strand, within H281DRAFT_01126 at 1268.572 kb on - strand, within H281DRAFT_01126 at 1268.799 kb on + strand, within H281DRAFT_01126 at 1269.091 kb on - strand, within H281DRAFT_01126 at 1269.093 kb on + strand, within H281DRAFT_01126 at 1269.093 kb on + strand, within H281DRAFT_01126 at 1269.093 kb on + strand, within H281DRAFT_01126 at 1269.151 kb on - strand, within H281DRAFT_01126 at 1269.153 kb on + strand, within H281DRAFT_01126 at 1269.153 kb on + strand, within H281DRAFT_01126 at 1269.154 kb on - strand at 1269.154 kb on - strand, within H281DRAFT_01126 at 1269.578 kb on + strand at 1269.723 kb on - strand at 1269.895 kb on - strand, within H281DRAFT_01127 at 1269.895 kb on - strand, within H281DRAFT_01127 at 1270.294 kb on + strand, within H281DRAFT_01127 at 1270.540 kb on + strand, within H281DRAFT_01127
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 1,266,780 + -0.6 1,266,836 + +0.3 1,266,837 - +0.5 1,266,978 + H281DRAFT_01124 0.61 +0.3 1,267,144 - -1.8 1,267,144 - +0.7 1,267,489 - H281DRAFT_01125 0.61 -1.7 1,267,600 - H281DRAFT_01125 0.81 -0.6 1,267,704 - -0.5 1,267,704 - -1.0 1,267,878 + -0.8 1,268,300 + -0.0 1,268,301 - H281DRAFT_01126 0.32 +0.4 1,268,301 - H281DRAFT_01126 0.32 +0.0 1,268,571 + H281DRAFT_01126 0.47 +0.1 1,268,571 + H281DRAFT_01126 0.47 +0.6 1,268,571 + H281DRAFT_01126 0.47 -0.7 1,268,571 + H281DRAFT_01126 0.47 -0.8 1,268,571 + H281DRAFT_01126 0.47 -0.2 1,268,572 - H281DRAFT_01126 0.47 +0.7 1,268,572 - H281DRAFT_01126 0.47 +0.2 1,268,572 - H281DRAFT_01126 0.47 -0.4 1,268,799 + H281DRAFT_01126 0.59 +0.1 1,269,091 - H281DRAFT_01126 0.75 +0.1 1,269,093 + H281DRAFT_01126 0.75 -0.3 1,269,093 + H281DRAFT_01126 0.75 +0.3 1,269,093 + H281DRAFT_01126 0.75 -0.6 1,269,151 - H281DRAFT_01126 0.78 -0.0 1,269,153 + H281DRAFT_01126 0.78 +0.0 1,269,153 + H281DRAFT_01126 0.78 -1.5 1,269,154 - +0.6 1,269,154 - H281DRAFT_01126 0.78 +0.4 1,269,578 + +0.8 1,269,723 - -2.4 1,269,895 - H281DRAFT_01127 0.11 -1.5 1,269,895 - H281DRAFT_01127 0.11 +0.3 1,270,294 + H281DRAFT_01127 0.25 -0.7 1,270,540 + H281DRAFT_01127 0.33 +0.0
Or see this region's nucleotide sequence