Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3885

Experiment: 1-ethyl-3-methylimidazolium chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 5 mM
3,993,530	+		Ga0059261_3884	0.86	+0.0
3,993,567	-		Ga0059261_3884	0.87	-0.3
3,993,692	+				+0.8
3,993,692	+				+0.4
3,993,692	+				-0.1
3,993,692	+				+0.6
3,993,693	-				-0.1
3,993,693	-				-0.2
3,993,693	-				+0.4
3,993,693	-				+1.2
3,993,693	-				-0.4
3,993,693	-				+0.7
3,993,693	-				-0.6
3,993,740	+				+0.1
3,993,740	+				+1.6
3,993,740	+				+0.0
3,993,740	+				+0.1
3,993,827	+				+1.3
3,993,827	+				-0.2
3,993,827	+				-0.1
3,993,827	+				-1.9
3,993,827	+				-1.3
3,993,827	+				+0.4
3,993,827	+				+0.3
3,993,827	+				+2.1
3,993,827	+				+0.0
3,993,827	+				+0.0
3,993,827	+				-1.2
3,993,827	+				-1.7
3,993,827	+				-1.0
3,993,827	+				-0.3
3,993,827	+				-0.6
3,993,827	+				-0.3
3,993,827	+				+0.1
3,993,828	-				-0.3
3,993,828	-				+0.4
3,993,828	-				+1.7
3,993,828	-				-0.4
3,993,828	-				+1.0
3,993,828	-				+0.9
3,993,828	-				+1.0
3,993,828	-				+0.0
3,993,828	-				-0.5
3,993,828	-				-0.7
3,993,828	-				-0.0
3,993,828	-				+0.2
3,993,838	-				+0.5
3,993,884	+				+2.3
3,993,884	+				+0.1
3,993,885	-				-0.1
3,993,885	-				+0.7
3,994,075	+		Ga0059261_3885	0.42	-0.7
3,994,075	+		Ga0059261_3885	0.42	+0.3
3,994,076	-		Ga0059261_3885	0.42	-2.3
3,994,415	-				+0.0
3,994,726	+		Ga0059261_3886	0.43	-0.7
3,994,726	+		Ga0059261_3886	0.43	-0.1
3,994,727	-		Ga0059261_3886	0.43	+1.0
3,994,727	-		Ga0059261_3886	0.43	-1.8
3,994,727	-		Ga0059261_3886	0.43	-1.2
3,994,903	+		Ga0059261_3886	0.69	+0.2
3,994,903	+		Ga0059261_3886	0.69	+0.1
3,994,903	+		Ga0059261_3886	0.69	-0.2
3,994,904	-		Ga0059261_3886	0.69	-0.4
3,994,904	-		Ga0059261_3886	0.69	-0.4
3,994,904	-		Ga0059261_3886	0.69	-0.0
3,994,904	-		Ga0059261_3886	0.69	+1.0
3,994,904	-		Ga0059261_3886	0.69	+0.5
3,994,904	-		Ga0059261_3886	0.69	-0.8
3,995,005	+		Ga0059261_3886	0.83	+0.7
3,995,005	+		Ga0059261_3886	0.83	+0.3
3,995,005	+		Ga0059261_3886	0.83	-0.1
3,995,005	+		Ga0059261_3886	0.83	-0.4
3,995,006	-		Ga0059261_3886	0.83	+0.2
3,995,006	-		Ga0059261_3886	0.83	+0.2
3,995,006	-		Ga0059261_3886	0.83	+0.2
3,995,013	+		Ga0059261_3886	0.84	-0.5
3,995,013	+		Ga0059261_3886	0.84	-0.2
3,995,014	-		Ga0059261_3886	0.84	+0.5
3,995,327	+		Ga0059261_3887	0.16	+0.1
3,995,367	+		Ga0059261_3887	0.20	-0.3
3,995,368	-		Ga0059261_3887	0.21	-0.5
3,995,372	+		Ga0059261_3887	0.21	-0.8
3,995,372	+		Ga0059261_3887	0.21	+0.2
3,995,373	-				+0.0
3,995,385	+		Ga0059261_3887	0.23	+0.2
3,995,385	+		Ga0059261_3887	0.23	+0.5
3,995,386	-		Ga0059261_3887	0.23	+0.3
3,995,386	-		Ga0059261_3887	0.23	+0.2
3,995,386	-		Ga0059261_3887	0.23	-0.9
3,995,386	-		Ga0059261_3887	0.23	-0.2
3,995,386	-		Ga0059261_3887	0.23	+0.0
3,995,389	-				+0.0
3,995,389	-		Ga0059261_3887	0.23	-1.6