Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3697

Experiment: 1-ethyl-3-methylimidazolium chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 5 mM
3,810,027	+				+0.9
3,810,027	+				-0.1
3,810,027	+				-0.9
3,810,027	+				-1.1
3,810,098	+				+0.5
3,810,099	-				-0.7
3,810,099	-				-1.0
3,810,099	-				-0.3
3,810,121	-				+0.1
3,810,137	+				-0.4
3,810,137	+				+0.3
3,810,138	-				+0.4
3,810,243	-				-0.2
3,810,250	+				-0.4
3,810,250	+				+0.5
3,810,251	-				-0.3
3,810,253	-				-2.5
3,810,253	-				-0.5
3,810,254	+				+0.2
3,810,254	+				+0.3
3,810,254	+				+0.3
3,810,254	+				+0.0
3,810,255	-				-0.7
3,810,255	-				+0.6
3,810,255	-				+1.4
3,810,255	-				-0.2
3,810,255	-				+0.5
3,810,255	-				+1.2
3,810,255	-				+0.6
3,810,281	+				-0.1
3,810,282	-				+0.4
3,810,347	-				+0.2
3,810,357	+				+0.4
3,810,358	-				-0.2
3,810,368	+				+1.8
3,810,369	-				+1.3
3,810,461	-				+0.1
3,810,461	-				+0.7
3,810,461	-				+0.5
3,810,468	+				+0.5
3,810,468	+				+0.7
3,810,469	-				+0.0
3,810,475	+				+0.1
3,810,475	+				+0.7
3,810,513	-				-0.1
3,810,525	+				-1.1
3,810,537	-				+0.5
3,810,537	-				+0.7
3,810,540	+				-1.9
3,810,583	+				-0.6
3,810,584	-				-0.9
3,810,606	+				-0.2
3,810,606	+				-1.4
3,810,606	+				-0.8
3,810,606	+				-0.8
3,810,606	+				+0.1
3,810,606	+				-0.1
3,810,606	+				-0.5
3,810,607	-				+0.5
3,810,607	-				-0.4
3,810,608	+				+0.3
3,810,608	+				-0.5
3,810,608	+				-0.9
3,810,608	+				-0.3
3,810,609	-				-0.1
3,810,609	-				+0.1
3,810,609	-				+0.3
3,810,609	-				-0.6
3,810,609	-				+0.1
3,810,609	-				+0.3
3,810,609	-				+0.5
3,810,609	-				-0.1
3,810,634	+				+0.1
3,810,635	-				+0.1
3,810,635	-				-0.7
3,810,682	-		Ga0059261_3696	0.10	-0.8
3,810,769	+		Ga0059261_3696	0.33	+1.1
3,810,771	+		Ga0059261_3696	0.34	+0.6
3,810,771	+		Ga0059261_3696	0.34	+0.4
3,810,771	+		Ga0059261_3696	0.34	-0.8
3,810,771	+		Ga0059261_3696	0.34	+0.3
3,810,772	-		Ga0059261_3696	0.34	-0.1
3,810,772	-		Ga0059261_3696	0.34	+0.4
3,810,843	+		Ga0059261_3696	0.53	-1.0
3,810,843	+		Ga0059261_3696	0.53	-0.3
3,810,843	+		Ga0059261_3696	0.53	-0.5
3,810,844	-		Ga0059261_3696	0.53	-1.6
3,810,844	-		Ga0059261_3696	0.53	-0.1
3,810,844	-		Ga0059261_3696	0.53	+0.5
3,810,844	-		Ga0059261_3696	0.53	+0.9
3,811,118	+		Ga0059261_3697	0.35	-0.1
3,811,118	+		Ga0059261_3697	0.35	-0.7
3,811,118	+		Ga0059261_3697	0.35	+0.3
3,811,118	+		Ga0059261_3697	0.35	+0.7
3,811,118	+		Ga0059261_3697	0.35	-1.1
3,811,118	+		Ga0059261_3697	0.35	+0.3
3,811,118	+		Ga0059261_3697	0.35	+0.7
3,811,118	+		Ga0059261_3697	0.35	+0.4
3,811,118	+		Ga0059261_3697	0.35	+0.9
3,811,118	+		Ga0059261_3697	0.35	+0.0
3,811,118	+		Ga0059261_3697	0.35	+0.5
3,811,119	-		Ga0059261_3697	0.35	-0.6
3,811,119	-		Ga0059261_3697	0.35	-1.4
3,811,119	-		Ga0059261_3697	0.35	+0.9
3,811,119	-		Ga0059261_3697	0.35	-0.2
3,811,119	-		Ga0059261_3697	0.35	+0.0
3,811,119	-		Ga0059261_3697	0.35	+0.1
3,811,119	-		Ga0059261_3697	0.35	-0.3
3,811,119	-		Ga0059261_3697	0.35	-0.1
3,811,119	-		Ga0059261_3697	0.35	+0.1
3,811,119	-		Ga0059261_3697	0.35	+1.4
3,811,119	-		Ga0059261_3697	0.35	+0.9
3,811,119	-		Ga0059261_3697	0.35	+0.8
3,811,119	-		Ga0059261_3697	0.35	+1.4
3,811,119	-		Ga0059261_3697	0.35	+0.5
3,811,119	-		Ga0059261_3697	0.35	+0.4
3,811,119	-		Ga0059261_3697	0.35	+0.3
3,811,311	+				+1.3
3,811,353	+				-0.5
3,811,353	+				-0.1
3,811,354	-				+0.7
3,811,354	-				-0.1
3,811,354	-				-0.3
3,811,496	+				-0.3
3,811,496	+				-1.4
3,811,496	+				-0.1
3,811,496	+				-0.4
3,811,496	+				-0.2
3,811,497	-				-1.9
3,811,497	-				-0.2
3,811,522	-		Ga0059261_3698	0.11	+0.9
3,811,522	-		Ga0059261_3698	0.11	-2.2
3,811,523	+				+0.9
3,811,523	+		Ga0059261_3698	0.11	+0.8
3,811,523	+		Ga0059261_3698	0.11	+2.2
3,811,523	+		Ga0059261_3698	0.11	-1.4
3,811,523	+		Ga0059261_3698	0.11	+1.2
3,811,523	+		Ga0059261_3698	0.11	-0.6
3,811,523	+		Ga0059261_3698	0.11	+1.3
3,811,523	+		Ga0059261_3698	0.11	+0.1
3,811,523	+		Ga0059261_3698	0.11	-0.1
3,811,523	+		Ga0059261_3698	0.11	-2.8
3,811,523	+		Ga0059261_3698	0.11	-0.5
3,811,523	+		Ga0059261_3698	0.11	+0.0
3,811,523	+		Ga0059261_3698	0.11	+0.9
3,811,524	-		Ga0059261_3698	0.11	+0.2
3,811,524	-		Ga0059261_3698	0.11	+0.1
3,811,524	-		Ga0059261_3698	0.11	-0.6
3,811,524	-		Ga0059261_3698	0.11	+0.3
3,811,524	-		Ga0059261_3698	0.11	+0.3
3,811,524	-		Ga0059261_3698	0.11	-1.9
3,811,524	-		Ga0059261_3698	0.11	-1.0
3,811,524	-		Ga0059261_3698	0.11	-0.9
3,811,524	-		Ga0059261_3698	0.11	-0.9
3,811,524	-				+1.5
3,811,616	+		Ga0059261_3698	0.24	+0.6
3,811,616	+		Ga0059261_3698	0.24	+0.3
3,811,616	+		Ga0059261_3698	0.24	-0.5
3,811,616	+		Ga0059261_3698	0.24	+2.5
3,811,616	+		Ga0059261_3698	0.24	-0.4
3,811,617	-		Ga0059261_3698	0.24	-0.2
3,811,617	-		Ga0059261_3698	0.24	-0.4
3,811,617	-		Ga0059261_3698	0.24	-1.5
3,811,617	-		Ga0059261_3698	0.24	+0.8
3,811,688	+		Ga0059261_3698	0.34	-0.4
3,811,688	+		Ga0059261_3698	0.34	-1.2
3,811,688	+		Ga0059261_3698	0.34	-0.2
3,811,688	+		Ga0059261_3698	0.34	-0.5
3,811,688	+		Ga0059261_3698	0.34	+0.6
3,811,689	-		Ga0059261_3698	0.35	-0.3
3,811,689	-		Ga0059261_3698	0.35	+0.1
3,811,859	+		Ga0059261_3698	0.59	+0.6
3,811,859	+		Ga0059261_3698	0.59	+0.7
3,811,859	+		Ga0059261_3698	0.59	-0.4
3,811,859	+		Ga0059261_3698	0.59	-1.6
3,811,860	-		Ga0059261_3698	0.59	+0.1
3,811,860	-		Ga0059261_3698	0.59	-1.4
3,811,860	-		Ga0059261_3698	0.59	+1.3
3,811,860	-		Ga0059261_3698	0.59	-0.3
3,811,973	+		Ga0059261_3698	0.75	-0.3
3,811,973	+		Ga0059261_3698	0.75	+0.8
3,811,974	-		Ga0059261_3698	0.75	+0.8
3,811,983	+		Ga0059261_3698	0.76	-2.1
3,811,984	-		Ga0059261_3698	0.76	+0.1
3,811,984	-		Ga0059261_3698	0.76	+1.4
3,812,018	+		Ga0059261_3698	0.81	+0.2
3,812,019	-		Ga0059261_3698	0.81	-0.5
3,812,019	-		Ga0059261_3698	0.81	-0.3
3,812,019	-		Ga0059261_3698	0.81	+1.3
3,812,019	-		Ga0059261_3698	0.81	+0.3
3,812,024	+		Ga0059261_3698	0.82	+0.3
3,812,024	+		Ga0059261_3698	0.82	-0.4
3,812,024	+		Ga0059261_3698	0.82	-0.4
3,812,025	-		Ga0059261_3698	0.82	-0.2
3,812,025	-		Ga0059261_3698	0.82	+0.1
3,812,025	-		Ga0059261_3698	0.82	+0.2
3,812,069	+		Ga0059261_3698	0.88	+0.4
3,812,069	+		Ga0059261_3698	0.88	-0.3
3,812,069	+		Ga0059261_3698	0.88	+0.2
3,812,069	+		Ga0059261_3698	0.88	-0.1
3,812,069	+		Ga0059261_3698	0.88	+1.2
3,812,069	+		Ga0059261_3698	0.88	-0.1
3,812,070	-		Ga0059261_3698	0.88	+0.4
3,812,070	-		Ga0059261_3698	0.88	-0.1
3,812,070	-		Ga0059261_3698	0.88	-0.2
3,812,070	-		Ga0059261_3698	0.88	-0.5
3,812,070	-				+0.9
3,812,070	-				+0.4
3,812,214	-				+1.2
3,812,218	+				-0.1
3,812,219	-				+0.2