Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3293

Experiment: 1-ethyl-3-methylimidazolium chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 5 mM
3,420,066	-				+0.6
3,420,203	+				+0.7
3,420,203	+				-0.1
3,420,203	+				+0.0
3,420,243	+				-0.1
3,420,243	+				-0.2
3,420,244	-				-1.3
3,420,244	-				+0.4
3,420,244	-				-0.9
3,420,244	-				+0.0
3,420,244	-				-0.4
3,420,322	+		Ga0059261_3291	0.25	+0.4
3,420,322	+		Ga0059261_3291	0.25	+0.3
3,420,323	-		Ga0059261_3291	0.25	+0.8
3,420,323	-		Ga0059261_3291	0.25	+0.2
3,420,323	-		Ga0059261_3291	0.25	-0.2
3,420,323	-		Ga0059261_3291	0.25	+0.2
3,420,323	-				+0.5
3,420,361	+		Ga0059261_3291	0.35	+0.3
3,420,361	+		Ga0059261_3291	0.35	-0.1
3,420,361	+		Ga0059261_3291	0.35	+0.0
3,420,362	-		Ga0059261_3291	0.35	-0.4
3,420,362	-		Ga0059261_3291	0.35	-0.5
3,420,362	-		Ga0059261_3291	0.35	-0.3
3,420,362	-		Ga0059261_3291	0.35	-0.4
3,420,406	+		Ga0059261_3291	0.46	+0.5
3,420,406	+		Ga0059261_3291	0.46	-0.3
3,420,406	+		Ga0059261_3291	0.46	-0.3
3,420,406	+		Ga0059261_3291	0.46	-1.8
3,420,406	+		Ga0059261_3291	0.46	-0.6
3,420,406	+		Ga0059261_3291	0.46	+0.6
3,420,407	-		Ga0059261_3291	0.46	+1.0
3,420,407	-		Ga0059261_3291	0.46	+0.0
3,420,407	-		Ga0059261_3291	0.46	-0.0
3,420,407	-		Ga0059261_3291	0.46	-0.2
3,420,409	+		Ga0059261_3291	0.47	+0.8
3,420,409	+		Ga0059261_3291	0.47	+0.1
3,420,409	+		Ga0059261_3291	0.47	-0.2
3,420,409	+		Ga0059261_3291	0.47	+0.3
3,420,410	-		Ga0059261_3291	0.47	+0.8
3,420,410	-		Ga0059261_3291	0.47	-0.7
3,420,457	+		Ga0059261_3291	0.59	-1.5
3,420,457	+		Ga0059261_3291	0.59	+0.1
3,420,458	-		Ga0059261_3291	0.59	-0.8
3,420,458	-		Ga0059261_3291	0.59	+0.3
3,420,458	-		Ga0059261_3291	0.59	+0.6
3,420,458	-		Ga0059261_3291	0.59	-1.0
3,420,458	-		Ga0059261_3291	0.59	+1.0
3,420,535	+		Ga0059261_3291	0.78	-0.4
3,420,535	+		Ga0059261_3291	0.78	+0.5
3,420,535	+		Ga0059261_3291	0.78	-0.3
3,420,535	+		Ga0059261_3291	0.78	+0.1
3,420,535	+		Ga0059261_3291	0.78	-0.2
3,420,535	+		Ga0059261_3291	0.78	-0.0
3,420,536	-		Ga0059261_3291	0.78	-0.5
3,420,536	-		Ga0059261_3291	0.78	-0.2
3,420,536	-		Ga0059261_3291	0.78	-0.5
3,420,536	-		Ga0059261_3291	0.78	-0.8
3,420,536	-		Ga0059261_3291	0.78	+0.1
3,420,536	-		Ga0059261_3291	0.78	+0.6
3,420,536	-		Ga0059261_3291	0.78	-0.6
3,420,536	-		Ga0059261_3291	0.78	+0.3
3,420,536	-		Ga0059261_3291	0.78	-0.0
3,420,536	-		Ga0059261_3291	0.78	+0.2
3,420,536	-		Ga0059261_3291	0.78	+0.5
3,420,556	+		Ga0059261_3291	0.83	-0.5
3,420,556	+		Ga0059261_3291	0.83	+0.4
3,420,556	+		Ga0059261_3291	0.83	+0.0
3,420,556	+		Ga0059261_3291	0.83	-0.5
3,420,556	+		Ga0059261_3291	0.83	-1.3
3,420,556	+		Ga0059261_3291	0.83	+0.8
3,420,556	+		Ga0059261_3291	0.83	+0.2
3,420,556	+		Ga0059261_3291	0.83	+0.4
3,420,557	-		Ga0059261_3291	0.84	-0.3
3,420,557	-		Ga0059261_3291	0.84	+0.1
3,420,557	-		Ga0059261_3291	0.84	-0.4
3,420,557	-		Ga0059261_3291	0.84	+0.0
3,420,557	-		Ga0059261_3291	0.84	+0.2
3,420,557	-				+0.3
3,420,557	-		Ga0059261_3291	0.84	-0.2
3,420,559	+		Ga0059261_3291	0.84	+0.3
3,420,559	+		Ga0059261_3291	0.84	+0.5
3,420,559	+		Ga0059261_3291	0.84	-0.2
3,420,560	-		Ga0059261_3291	0.84	+0.5
3,420,560	-		Ga0059261_3291	0.84	-0.1
3,420,619	+				+0.6
3,420,696	+				+0.7
3,420,880	+		Ga0059261_3292	0.58	+0.5
3,420,880	+		Ga0059261_3292	0.58	+0.4
3,420,881	-		Ga0059261_3292	0.58	+1.5
3,420,881	-		Ga0059261_3292	0.58	+0.5
3,420,881	-		Ga0059261_3292	0.58	+0.3
3,420,881	-		Ga0059261_3292	0.58	+0.0
3,420,881	-		Ga0059261_3292	0.58	-1.1
3,420,881	-		Ga0059261_3292	0.58	+0.1
3,420,881	-		Ga0059261_3292	0.58	-0.2
3,420,963	+		Ga0059261_3292	0.83	-0.6
3,420,963	+		Ga0059261_3292	0.83	-0.2
3,420,963	+		Ga0059261_3292	0.83	-0.3
3,420,963	+		Ga0059261_3292	0.83	-1.2
3,420,964	-		Ga0059261_3292	0.84	+0.3
3,420,964	-		Ga0059261_3292	0.84	+0.3
3,420,964	-		Ga0059261_3292	0.84	-0.2
3,420,964	-		Ga0059261_3292	0.84	+0.7
3,420,964	-		Ga0059261_3292	0.84	+0.8
3,420,964	-		Ga0059261_3292	0.84	-0.2
3,420,964	-		Ga0059261_3292	0.84	-0.5
3,420,964	-		Ga0059261_3292	0.84	+0.4
3,421,026	+				-0.1
3,421,026	+				-0.4
3,421,026	+				-1.4
3,421,027	-				+0.6
3,421,027	-				-0.6
3,421,027	-				-0.9
3,421,123	+		Ga0059261_3293	0.19	-0.4
3,421,123	+		Ga0059261_3293	0.19	-0.4
3,421,123	+		Ga0059261_3293	0.19	-0.4
3,421,123	+		Ga0059261_3293	0.19	+1.0
3,421,123	+		Ga0059261_3293	0.19	-0.1
3,421,123	+		Ga0059261_3293	0.19	-1.1
3,421,123	+		Ga0059261_3293	0.19	+0.3
3,421,124	-		Ga0059261_3293	0.19	-1.2
3,421,124	-		Ga0059261_3293	0.19	-0.1
3,421,124	-		Ga0059261_3293	0.19	+0.1
3,421,124	-		Ga0059261_3293	0.19	+0.0
3,421,159	+		Ga0059261_3293	0.29	+0.5
3,421,159	+		Ga0059261_3293	0.29	-0.5
3,421,160	-		Ga0059261_3293	0.29	+1.0
3,421,160	-		Ga0059261_3293	0.29	+0.2
3,421,160	-		Ga0059261_3293	0.29	-0.2
3,421,160	-		Ga0059261_3293	0.29	-0.1
3,421,160	-		Ga0059261_3293	0.29	+0.8
3,421,291	+		Ga0059261_3293	0.65	-0.2
3,421,291	+		Ga0059261_3293	0.65	-0.5
3,421,291	+		Ga0059261_3293	0.65	+0.2
3,421,291	+		Ga0059261_3293	0.65	+0.2
3,421,291	+		Ga0059261_3293	0.65	+0.0
3,421,291	+		Ga0059261_3293	0.65	-0.5
3,421,292	-		Ga0059261_3293	0.66	-0.3
3,421,292	-		Ga0059261_3293	0.66	+1.0
3,421,292	-		Ga0059261_3293	0.66	-0.1
3,421,292	-		Ga0059261_3293	0.66	+0.2
3,421,309	+		Ga0059261_3293	0.70	+0.1
3,421,310	-		Ga0059261_3293	0.71	+1.6
3,421,310	-		Ga0059261_3293	0.71	+0.3
3,421,310	-		Ga0059261_3293	0.71	-0.8
3,421,348	-		Ga0059261_3293	0.81	-1.4
3,421,472	+				-0.5
3,421,472	+				-0.5
3,421,473	-				-0.8
3,421,473	-				-0.1
3,421,473	-				+0.9
3,421,474	+				-0.1
3,421,474	+				-0.0
3,421,474	+				-1.1
3,421,475	-				+0.4
3,421,475	-				-0.3
3,421,530	+				-0.3
3,421,530	+				-0.1
3,421,530	+				-0.1
3,421,530	+				-0.5
3,421,531	-				-0.2
3,421,531	-				+1.5
3,421,531	-				-0.0
3,421,531	-				-1.4
3,421,539	+				-0.6
3,421,539	+				-1.2
3,421,539	+				+1.0
3,421,539	+				-0.3
3,421,539	+				+0.3
3,421,540	-				+0.8
3,421,540	-				-0.1
3,421,540	-				-0.2
3,421,540	-				-0.1
3,421,540	-				-0.9
3,421,868	+				+0.4
3,421,869	-				+0.0
3,421,869	-				-1.7
3,422,052	+		Ga0059261_3295	0.49	+1.2
3,422,052	+		Ga0059261_3295	0.49	-0.1
3,422,054	+		Ga0059261_3295	0.49	-0.1
3,422,054	+		Ga0059261_3295	0.49	-0.6
3,422,054	+		Ga0059261_3295	0.49	+0.3
3,422,054	+		Ga0059261_3295	0.49	+0.4
3,422,054	+		Ga0059261_3295	0.49	+0.4
3,422,054	+		Ga0059261_3295	0.49	-1.3
3,422,054	+		Ga0059261_3295	0.49	-0.0
3,422,054	+		Ga0059261_3295	0.49	-1.3
3,422,054	+		Ga0059261_3295	0.49	+0.4
3,422,054	+		Ga0059261_3295	0.49	-0.3
3,422,054	+		Ga0059261_3295	0.49	+1.0
3,422,054	+		Ga0059261_3295	0.49	-0.4
3,422,055	-		Ga0059261_3295	0.50	-0.1
3,422,055	-		Ga0059261_3295	0.50	+0.1
3,422,055	-		Ga0059261_3295	0.50	+0.8
3,422,055	-		Ga0059261_3295	0.50	-0.5
3,422,055	-		Ga0059261_3295	0.50	-0.1
3,422,153	+		Ga0059261_3295	0.76	+0.8
3,422,153	+		Ga0059261_3295	0.76	+1.2
3,422,153	+		Ga0059261_3295	0.76	+0.9
3,422,153	+		Ga0059261_3295	0.76	-1.4
3,422,153	+		Ga0059261_3295	0.76	+1.3
3,422,153	+		Ga0059261_3295	0.76	+0.2
3,422,154	-		Ga0059261_3295	0.76	+0.0
3,422,154	-		Ga0059261_3295	0.76	+0.3
3,422,154	-				+0.0
3,422,154	-		Ga0059261_3295	0.76	+0.1
3,422,154	-		Ga0059261_3295	0.76	-0.3
3,422,154	-		Ga0059261_3295	0.76	+0.3
3,422,154	-		Ga0059261_3295	0.76	-0.8
3,422,154	-		Ga0059261_3295	0.76	-0.3
3,422,154	-		Ga0059261_3295	0.76	+1.7
3,422,154	-		Ga0059261_3295	0.76	-0.2
3,422,154	-		Ga0059261_3295	0.76	-0.0
3,422,154	-		Ga0059261_3295	0.76	+0.1
3,422,257	+				-0.2
3,422,258	-				-1.4