Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2976

Experiment: 1-ethyl-3-methylimidazolium chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 5 mM
3,091,119	+		Ga0059261_2975	0.48	-0.2
3,091,119	+		Ga0059261_2975	0.48	-0.3
3,091,119	+		Ga0059261_2975	0.48	-1.0
3,091,120	-		Ga0059261_2975	0.48	-0.1
3,091,120	-		Ga0059261_2975	0.48	+0.2
3,091,120	-		Ga0059261_2975	0.48	-0.3
3,091,120	-		Ga0059261_2975	0.48	+0.4
3,091,120	-		Ga0059261_2975	0.48	+1.6
3,091,203	+		Ga0059261_2975	0.54	-0.4
3,091,203	+		Ga0059261_2975	0.54	-1.8
3,091,203	+		Ga0059261_2975	0.54	-0.4
3,091,204	-		Ga0059261_2975	0.54	+0.6
3,091,204	-		Ga0059261_2975	0.54	-0.2
3,091,204	-		Ga0059261_2975	0.54	-0.5
3,091,269	+		Ga0059261_2975	0.59	+0.6
3,091,269	+		Ga0059261_2975	0.59	+0.2
3,091,320	+		Ga0059261_2975	0.62	-0.5
3,091,320	+		Ga0059261_2975	0.62	+0.1
3,091,320	+		Ga0059261_2975	0.62	+0.6
3,091,320	+				+1.6
3,091,321	-		Ga0059261_2975	0.62	-0.4
3,091,321	-		Ga0059261_2975	0.62	+0.9
3,091,321	-		Ga0059261_2975	0.62	+1.3
3,091,321	-		Ga0059261_2975	0.62	-0.0
3,091,413	-		Ga0059261_2975	0.69	-0.8
3,091,458	+		Ga0059261_2975	0.72	-0.6
3,091,458	+		Ga0059261_2975	0.72	-0.4
3,091,459	-		Ga0059261_2975	0.72	+0.1
3,091,460	+		Ga0059261_2975	0.72	-0.2
3,091,460	+		Ga0059261_2975	0.72	+0.2
3,091,460	+		Ga0059261_2975	0.72	+0.0
3,091,460	+		Ga0059261_2975	0.72	+0.1
3,091,461	-		Ga0059261_2975	0.72	+0.5
3,091,461	-		Ga0059261_2975	0.72	+0.1
3,091,461	-		Ga0059261_2975	0.72	+0.0
3,091,461	-		Ga0059261_2975	0.72	+0.1
3,091,487	+		Ga0059261_2975	0.74	-0.4
3,091,549	-		Ga0059261_2975	0.78	+0.2
3,091,549	-		Ga0059261_2975	0.78	+0.1
3,091,791	+				-0.4
3,091,791	+				-0.5
3,091,791	+				+0.3
3,091,792	-				-0.6
3,091,934	+				+0.9
3,091,934	+				-0.1
3,091,934	+				-1.2
3,091,934	+				+0.2
3,091,934	+				+0.3
3,091,934	+				-0.6
3,091,935	-				+0.0
3,091,935	-				-0.5
3,091,935	-				-0.5
3,091,935	-				+0.6
3,092,034	+		Ga0059261_2976	0.13	+0.1
3,092,034	+		Ga0059261_2976	0.13	-1.3
3,092,034	+		Ga0059261_2976	0.13	+0.3
3,092,034	+		Ga0059261_2976	0.13	+0.2
3,092,035	-		Ga0059261_2976	0.13	+0.7
3,092,035	-		Ga0059261_2976	0.13	-1.2
3,092,283	+		Ga0059261_2976	0.45	-0.1
3,092,405	+		Ga0059261_2976	0.60	-1.0
3,092,405	+		Ga0059261_2976	0.60	+0.3
3,092,406	-		Ga0059261_2976	0.60	+0.4
3,092,406	-		Ga0059261_2976	0.60	-1.3
3,092,406	-		Ga0059261_2976	0.60	-0.1
3,092,409	+		Ga0059261_2976	0.61	+0.8
3,092,409	+		Ga0059261_2976	0.61	-0.5
3,092,409	+		Ga0059261_2976	0.61	+0.0
3,092,410	-		Ga0059261_2976	0.61	+0.2
3,092,410	-		Ga0059261_2976	0.61	+0.4
3,092,410	-		Ga0059261_2976	0.61	+0.8
3,092,410	-		Ga0059261_2976	0.61	-1.5
3,092,410	-		Ga0059261_2976	0.61	+0.3
3,092,410	-		Ga0059261_2976	0.61	-0.5
3,092,410	-		Ga0059261_2976	0.61	-0.2
3,092,410	-		Ga0059261_2976	0.61	+0.3
3,092,632	+		Ga0059261_2976	0.89	-0.3
3,092,633	-		Ga0059261_2976	0.89	-0.4
3,092,818	+				-0.2
3,092,866	+				-0.2
3,092,866	+				-0.1
3,092,866	+				+0.2
3,092,866	+				-1.1
3,092,866	+				-0.1
3,092,866	+				-0.4
3,092,867	-				-1.7
3,092,867	-				-0.5
3,092,867	-				-1.8
3,092,867	-				-0.5
3,092,867	-				-1.4
3,092,867	-				+0.3
3,092,867	-				-0.0
3,092,867	-				+0.3
3,092,867	-				+0.3
3,092,867	-				+1.7
3,092,867	-				-0.1
3,092,867	-				-0.2
3,092,867	-				-0.5
3,092,867	-				+0.2
3,092,869	-				+0.9
3,092,869	-				+0.0
3,092,870	-				-0.2
3,092,972	-		Ga0059261_2977	0.16	+1.3
3,092,972	-		Ga0059261_2977	0.16	+0.0
3,092,972	-		Ga0059261_2977	0.16	-0.4
3,092,983	+		Ga0059261_2977	0.17	+0.3
3,092,983	+		Ga0059261_2977	0.17	+1.2
3,092,983	+		Ga0059261_2977	0.17	-0.1
3,092,984	-		Ga0059261_2977	0.17	-0.3
3,092,985	+		Ga0059261_2977	0.17	+0.3
3,092,985	+		Ga0059261_2977	0.17	-0.5
3,092,986	-		Ga0059261_2977	0.17	-0.3
3,092,986	-		Ga0059261_2977	0.17	-0.1
3,093,067	-		Ga0059261_2977	0.24	+0.1
3,093,085	+				+1.2
3,093,232	-		Ga0059261_2977	0.36	+0.2
3,093,232	-		Ga0059261_2977	0.36	+0.5
3,093,352	+		Ga0059261_2977	0.45	+0.8
3,093,352	+		Ga0059261_2977	0.45	-0.6
3,093,352	+		Ga0059261_2977	0.45	-1.0
3,093,352	+		Ga0059261_2977	0.45	-0.2
3,093,352	+		Ga0059261_2977	0.45	-0.4
3,093,352	+		Ga0059261_2977	0.45	+0.6
3,093,352	+		Ga0059261_2977	0.45	-0.1
3,093,353	-		Ga0059261_2977	0.46	-0.3
3,093,353	-		Ga0059261_2977	0.46	-0.3
3,093,353	-		Ga0059261_2977	0.46	-0.1
3,093,353	-		Ga0059261_2977	0.46	+0.6
3,093,353	-		Ga0059261_2977	0.46	-0.4
3,093,353	-		Ga0059261_2977	0.46	+0.2
3,093,442	+		Ga0059261_2977	0.52	-0.1
3,093,443	-		Ga0059261_2977	0.53	-1.0
3,093,479	-		Ga0059261_2977	0.55	-0.4
3,093,479	-		Ga0059261_2977	0.55	-0.2
3,093,541	+				+0.2
3,093,542	-		Ga0059261_2977	0.60	+0.1
3,093,542	-		Ga0059261_2977	0.60	+0.4
3,093,556	+		Ga0059261_2977	0.61	-0.7
3,093,556	+		Ga0059261_2977	0.61	-0.0
3,093,556	+		Ga0059261_2977	0.61	+0.2
3,093,556	+		Ga0059261_2977	0.61	-0.2
3,093,557	-		Ga0059261_2977	0.61	+1.3
3,093,557	-		Ga0059261_2977	0.61	-0.8
3,093,557	-		Ga0059261_2977	0.61	-0.7
3,093,557	-		Ga0059261_2977	0.61	+0.4
3,093,557	-		Ga0059261_2977	0.61	+0.5
3,093,601	+		Ga0059261_2977	0.65	-0.2
3,093,601	+		Ga0059261_2977	0.65	+1.0
3,093,602	-				-1.7
3,093,602	-		Ga0059261_2977	0.65	+0.2
3,093,602	-				+0.2
3,093,679	+		Ga0059261_2977	0.71	-0.3
3,093,679	+		Ga0059261_2977	0.71	+0.2
3,093,679	+		Ga0059261_2977	0.71	+0.2
3,093,680	-		Ga0059261_2977	0.71	+0.2
3,093,680	-		Ga0059261_2977	0.71	+0.6
3,093,680	-		Ga0059261_2977	0.71	-0.6