Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2845

Experiment: 1-ethyl-3-methylimidazolium chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 5 mM
2,953,977	+		Ga0059261_2844	0.11	-0.7
2,953,977	+		Ga0059261_2844	0.11	-0.6
2,953,977	+		Ga0059261_2844	0.11	-0.4
2,953,978	-		Ga0059261_2844	0.11	+0.6
2,953,978	-		Ga0059261_2844	0.11	+0.2
2,953,978	-		Ga0059261_2844	0.11	+0.1
2,953,978	-		Ga0059261_2844	0.11	-0.9
2,953,978	-		Ga0059261_2844	0.11	-1.0
2,953,978	-		Ga0059261_2844	0.11	+1.9
2,954,131	+		Ga0059261_2844	0.26	+0.1
2,954,167	+		Ga0059261_2844	0.29	-0.1
2,954,167	+		Ga0059261_2844	0.29	-0.3
2,954,167	+		Ga0059261_2844	0.29	-0.3
2,954,167	+		Ga0059261_2844	0.29	+0.0
2,954,167	+		Ga0059261_2844	0.29	+0.3
2,954,167	+		Ga0059261_2844	0.29	-0.1
2,954,167	+		Ga0059261_2844	0.29	-0.1
2,954,167	+		Ga0059261_2844	0.29	+2.2
2,954,168	-		Ga0059261_2844	0.29	-0.2
2,954,168	-		Ga0059261_2844	0.29	-0.6
2,954,168	-		Ga0059261_2844	0.29	+0.2
2,954,168	-		Ga0059261_2844	0.29	-0.1
2,954,168	-		Ga0059261_2844	0.29	+0.2
2,954,168	-		Ga0059261_2844	0.29	-0.4
2,954,168	-		Ga0059261_2844	0.29	+0.2
2,954,245	-		Ga0059261_2844	0.36	+0.4
2,954,263	+		Ga0059261_2844	0.38	-0.4
2,954,263	+		Ga0059261_2844	0.38	+0.8
2,954,263	+		Ga0059261_2844	0.38	-0.5
2,954,263	+		Ga0059261_2844	0.38	+0.3
2,954,263	+		Ga0059261_2844	0.38	+0.7
2,954,263	+		Ga0059261_2844	0.38	+0.8
2,954,264	-		Ga0059261_2844	0.38	+0.2
2,954,264	-		Ga0059261_2844	0.38	-1.5
2,954,264	-		Ga0059261_2844	0.38	-0.6
2,954,264	-		Ga0059261_2844	0.38	-1.1
2,954,264	-		Ga0059261_2844	0.38	-0.6
2,954,264	-		Ga0059261_2844	0.38	+0.7
2,954,314	+		Ga0059261_2844	0.43	+0.2
2,954,314	+		Ga0059261_2844	0.43	+0.7
2,954,314	+		Ga0059261_2844	0.43	+0.3
2,954,314	+		Ga0059261_2844	0.43	+0.0
2,954,314	+		Ga0059261_2844	0.43	+0.2
2,954,314	+		Ga0059261_2844	0.43	-0.1
2,954,314	+		Ga0059261_2844	0.43	+0.3
2,954,315	-		Ga0059261_2844	0.43	-0.9
2,954,315	-		Ga0059261_2844	0.43	-0.6
2,954,315	-		Ga0059261_2844	0.43	+0.6
2,954,315	-		Ga0059261_2844	0.43	+0.2
2,954,315	-		Ga0059261_2844	0.43	-0.2
2,954,315	-		Ga0059261_2844	0.43	-0.3
2,954,315	-		Ga0059261_2844	0.43	-0.3
2,954,315	-		Ga0059261_2844	0.43	+0.4
2,954,315	-		Ga0059261_2844	0.43	+0.4
2,954,339	-		Ga0059261_2844	0.45	-0.1
2,954,401	+		Ga0059261_2844	0.51	-0.3
2,954,402	-		Ga0059261_2844	0.51	-0.2
2,954,452	+		Ga0059261_2844	0.56	+0.6
2,954,452	+		Ga0059261_2844	0.56	-0.3
2,954,452	+		Ga0059261_2844	0.56	+0.7
2,954,452	+		Ga0059261_2844	0.56	-2.6
2,954,452	+		Ga0059261_2844	0.56	-0.0
2,954,452	+		Ga0059261_2844	0.56	+0.9
2,954,452	+		Ga0059261_2844	0.56	-0.2
2,954,452	+		Ga0059261_2844	0.56	-0.4
2,954,452	+				+0.6
2,954,453	-		Ga0059261_2844	0.56	-0.1
2,954,453	-		Ga0059261_2844	0.56	-2.9
2,954,453	-		Ga0059261_2844	0.56	+0.6
2,954,518	+		Ga0059261_2844	0.62	-0.0
2,954,518	+		Ga0059261_2844	0.62	+0.8
2,954,518	+		Ga0059261_2844	0.62	+1.0
2,954,519	-		Ga0059261_2844	0.62	+0.9
2,954,519	-		Ga0059261_2844	0.62	+0.3
2,954,519	-		Ga0059261_2844	0.62	-0.4
2,954,519	-		Ga0059261_2844	0.62	-0.0
2,954,674	+		Ga0059261_2844	0.77	+0.3
2,954,674	+		Ga0059261_2844	0.77	-0.8
2,954,675	-		Ga0059261_2844	0.77	+1.4
2,954,675	-		Ga0059261_2844	0.77	-0.1
2,954,675	-		Ga0059261_2844	0.77	+1.2
2,954,719	+		Ga0059261_2844	0.81	-0.8
2,954,719	+		Ga0059261_2844	0.81	-0.7
2,954,720	-		Ga0059261_2844	0.81	+0.8
2,954,720	-		Ga0059261_2844	0.81	-0.1
2,954,761	+		Ga0059261_2844	0.85	+2.6
2,954,761	+		Ga0059261_2844	0.85	-0.1
2,954,761	+		Ga0059261_2844	0.85	+0.4
2,954,762	-				-0.1
2,954,762	-				+0.4
2,954,764	+		Ga0059261_2844	0.85	-0.6
2,954,764	+		Ga0059261_2844	0.85	-0.4
2,954,764	+		Ga0059261_2844	0.85	+0.7
2,954,765	-		Ga0059261_2844	0.85	-0.8
2,954,765	-		Ga0059261_2844	0.85	-0.1
2,954,806	+		Ga0059261_2844	0.89	-0.4
2,954,806	+		Ga0059261_2844	0.89	+1.6
2,954,807	-		Ga0059261_2844	0.89	+0.4
2,954,807	-		Ga0059261_2844	0.89	+0.8
2,954,807	-		Ga0059261_2844	0.89	+0.2
2,954,807	-		Ga0059261_2844	0.89	-0.0
2,954,807	-		Ga0059261_2844	0.89	-0.7
2,954,807	-		Ga0059261_2844	0.89	+0.2
2,954,928	+				+0.3
2,954,928	+				+0.7
2,954,928	+				+0.3
2,954,929	-				-0.2
2,954,929	-				-0.4
2,954,929	-				-0.4
2,954,929	-				+0.3
2,954,929	-				-0.0
2,954,942	+				-0.0
2,954,942	+				-0.8
2,954,943	-				+1.0
2,955,037	+				+1.2
2,955,037	+				-0.1
2,955,037	+				-0.5
2,955,037	+				+1.8
2,955,037	+				-0.1
2,955,038	-				+0.2
2,955,038	-				-0.6
2,955,044	-				-0.2
2,955,044	-				-0.0
2,955,061	+				-0.0
2,955,061	+				+0.9
2,955,062	-				-0.5
2,955,062	-				-0.6
2,955,062	-				-0.4
2,955,062	-				+0.1
2,955,193	+		Ga0059261_2845	0.18	-0.4
2,955,193	+		Ga0059261_2845	0.18	+0.7
2,955,193	+		Ga0059261_2845	0.18	-0.4
2,955,193	+		Ga0059261_2845	0.18	+0.6
2,955,193	+		Ga0059261_2845	0.18	-0.1
2,955,193	+				-1.6
2,955,193	+		Ga0059261_2845	0.18	-0.0
2,955,194	-		Ga0059261_2845	0.18	+0.7
2,955,194	-		Ga0059261_2845	0.18	-0.4
2,955,194	-		Ga0059261_2845	0.18	+0.2
2,955,194	-		Ga0059261_2845	0.18	+0.5
2,955,194	-		Ga0059261_2845	0.18	-0.5
2,955,194	-				+1.2
2,955,194	-				+0.2
2,955,194	-		Ga0059261_2845	0.18	+0.1
2,955,194	-		Ga0059261_2845	0.18	+0.2
2,955,194	-		Ga0059261_2845	0.18	+0.2
2,955,194	-		Ga0059261_2845	0.18	-0.0
2,955,194	-		Ga0059261_2845	0.18	-0.3
2,955,195	+		Ga0059261_2845	0.18	-0.3
2,955,195	+		Ga0059261_2845	0.18	-0.4
2,955,196	-		Ga0059261_2845	0.18	+0.2
2,955,196	-		Ga0059261_2845	0.18	+1.5
2,955,196	-		Ga0059261_2845	0.18	-0.4
2,955,196	-		Ga0059261_2845	0.18	+0.2
2,955,313	+		Ga0059261_2845	0.27	+0.3
2,955,313	+		Ga0059261_2845	0.27	+0.1
2,955,313	+		Ga0059261_2845	0.27	+0.0
2,955,314	-		Ga0059261_2845	0.27	-1.0
2,955,314	-		Ga0059261_2845	0.27	+0.1
2,955,314	-		Ga0059261_2845	0.27	-1.1
2,955,314	-		Ga0059261_2845	0.27	+0.7
2,955,522	+		Ga0059261_2845	0.42	+0.0
2,955,522	+		Ga0059261_2845	0.42	+0.0
2,955,859	+		Ga0059261_2845	0.66	-0.1
2,955,859	+		Ga0059261_2845	0.66	+0.6
2,955,859	+		Ga0059261_2845	0.66	+0.4
2,955,860	-		Ga0059261_2845	0.66	+0.7
2,955,860	-		Ga0059261_2845	0.66	-0.7
2,955,861	+		Ga0059261_2845	0.66	+0.6
2,955,868	+		Ga0059261_2845	0.67	-0.9
2,955,868	+		Ga0059261_2845	0.67	-0.6
2,955,868	+		Ga0059261_2845	0.67	+0.3
2,955,868	+				+0.6
2,955,868	+		Ga0059261_2845	0.67	+0.1
2,955,868	+		Ga0059261_2845	0.67	-0.7
2,955,869	-		Ga0059261_2845	0.67	+0.3
2,955,869	-		Ga0059261_2845	0.67	-0.1
2,955,869	-		Ga0059261_2845	0.67	+0.2
2,955,869	-		Ga0059261_2845	0.67	-0.4
2,955,869	-		Ga0059261_2845	0.67	+0.4
2,955,869	-		Ga0059261_2845	0.67	-0.4
2,955,869	-		Ga0059261_2845	0.67	-1.2
2,955,869	-		Ga0059261_2845	0.67	+0.0
2,955,870	+		Ga0059261_2845	0.67	+0.8
2,955,870	+				+1.8
2,955,870	+		Ga0059261_2845	0.67	-0.4
2,955,870	+		Ga0059261_2845	0.67	+1.0
2,955,870	+		Ga0059261_2845	0.67	-0.0
2,955,870	+		Ga0059261_2845	0.67	-0.0
2,955,870	+		Ga0059261_2845	0.67	+0.6
2,955,870	+		Ga0059261_2845	0.67	-0.1
2,955,870	+		Ga0059261_2845	0.67	+0.2
2,955,870	+		Ga0059261_2845	0.67	-0.1
2,955,871	-		Ga0059261_2845	0.67	+0.6
2,955,871	-		Ga0059261_2845	0.67	-0.1
2,955,871	-		Ga0059261_2845	0.67	+0.1
2,955,895	+		Ga0059261_2845	0.69	-0.1
2,955,896	-		Ga0059261_2845	0.69	-0.1
2,955,896	-		Ga0059261_2845	0.69	-0.2
2,955,896	-		Ga0059261_2845	0.69	+0.9
2,955,896	-		Ga0059261_2845	0.69	+0.4
2,956,060	+		Ga0059261_2845	0.81	+0.1
2,956,060	+		Ga0059261_2845	0.81	-0.4
2,956,061	-		Ga0059261_2845	0.81	+0.1
2,956,061	-		Ga0059261_2845	0.81	-0.4
2,956,147	+		Ga0059261_2845	0.87	+0.6
2,956,147	+		Ga0059261_2845	0.87	+0.2
2,956,147	+		Ga0059261_2845	0.87	-1.5
2,956,148	-		Ga0059261_2845	0.87	+1.4
2,956,148	-		Ga0059261_2845	0.87	+0.2
2,956,148	-		Ga0059261_2845	0.87	-1.6
2,956,149	+		Ga0059261_2845	0.87	+0.3
2,956,149	+		Ga0059261_2845	0.87	+0.2
2,956,149	+		Ga0059261_2845	0.87	-0.1
2,956,149	+		Ga0059261_2845	0.87	-0.5
2,956,149	+		Ga0059261_2845	0.87	-0.4
2,956,150	-				-0.4
2,956,150	-		Ga0059261_2845	0.87	-0.6
2,956,150	-		Ga0059261_2845	0.87	+0.4
2,956,300	+				-0.7
2,956,300	+				-0.2
2,956,301	-				+0.5
2,956,301	-				-0.4
2,956,301	-				+0.2
2,956,301	-				-0.3
2,956,301	-				+1.2
2,956,301	-				-0.5
2,956,301	-				+0.2
2,956,302	+				+0.4
2,956,302	+				+0.6
2,956,302	+				+0.3
2,956,303	-				-0.8
2,956,448	+		Ga0059261_2846	0.16	+1.4
2,956,448	+		Ga0059261_2846	0.16	+0.2
2,956,448	+		Ga0059261_2846	0.16	-0.6
2,956,448	+		Ga0059261_2846	0.16	-1.1
2,956,448	+		Ga0059261_2846	0.16	+0.3
2,956,448	+		Ga0059261_2846	0.16	-0.0
2,956,448	+		Ga0059261_2846	0.16	-1.4
2,956,448	+		Ga0059261_2846	0.16	+0.5
2,956,449	-		Ga0059261_2846	0.16	+0.6
2,956,449	-		Ga0059261_2846	0.16	-0.0
2,956,449	-		Ga0059261_2846	0.16	+0.2
2,956,760	+		Ga0059261_2846	0.57	-0.3
2,956,760	+		Ga0059261_2846	0.57	+0.0
2,956,761	-		Ga0059261_2846	0.57	-0.5
2,956,761	-		Ga0059261_2846	0.57	+0.1
2,956,761	-		Ga0059261_2846	0.57	+0.5
2,956,761	-		Ga0059261_2846	0.57	-0.7
2,956,761	-		Ga0059261_2846	0.57	-0.4
2,956,813	-		Ga0059261_2846	0.63	-0.2
2,957,046	+				-0.4
2,957,046	+				+1.2
2,957,046	+				+0.4
2,957,046	+				+0.3
2,957,046	+				+0.0
2,957,046	+				-0.1
2,957,046	+				+0.0
2,957,046	+				+0.3
2,957,046	+				-1.1
2,957,047	-				+0.6
2,957,047	-				-1.4
2,957,047	-				-0.2
2,957,047	-				+1.5
2,957,047	-				-1.7
2,957,047	-				+0.0
2,957,047	-				+0.3
2,957,069	+				-0.4
2,957,091	+				-0.7
2,957,092	-				-0.0
2,957,199	+		Ga0059261_2847	0.14	+0.4
2,957,199	+		Ga0059261_2847	0.14	-1.0
2,957,199	+		Ga0059261_2847	0.14	-1.2
2,957,199	+		Ga0059261_2847	0.14	-0.2
2,957,199	+		Ga0059261_2847	0.14	-0.5
2,957,199	+		Ga0059261_2847	0.14	-0.3
2,957,200	-		Ga0059261_2847	0.14	+0.3
2,957,200	-		Ga0059261_2847	0.14	+0.0
2,957,200	-		Ga0059261_2847	0.14	-0.4
2,957,200	-		Ga0059261_2847	0.14	-1.1
2,957,200	-		Ga0059261_2847	0.14	-2.0
2,957,235	+		Ga0059261_2847	0.19	+0.6
2,957,235	+		Ga0059261_2847	0.19	-0.7
2,957,235	+		Ga0059261_2847	0.19	+0.1
2,957,269	+				+0.6
2,957,269	+				+1.2