Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1775

Experiment: 1-ethyl-3-methylimidazolium chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 5 mM
1,881,450	+				-0.5
1,881,450	+				+0.4
1,881,450	+				+0.9
1,881,488	+				-0.6
1,881,488	+				-0.3
1,881,488	+				+1.0
1,881,489	-				+0.1
1,881,489	-				+0.0
1,881,489	-				+0.0
1,881,489	-				-0.4
1,881,546	-		Ga0059261_1774	0.16	-0.7
1,881,546	-		Ga0059261_1774	0.16	-1.3
1,882,182	+				-1.1
1,882,190	+				+0.6
1,882,190	+				+0.1
1,882,190	+				+0.9
1,882,190	+				-0.1
1,882,190	+				+0.5
1,882,190	+				+0.3
1,882,190	+				+0.7
1,882,190	+				+0.2
1,882,353	+				-0.5
1,882,353	+				-1.8
1,882,353	+				+0.1
1,882,353	+				+0.9
1,882,353	+				+0.9
1,882,353	+				-0.5
1,882,353	+				+0.2
1,882,353	+				-1.4
1,882,354	-				-0.2
1,882,354	-				-0.2
1,882,354	-				-1.1
1,882,439	-				-0.5
1,882,444	-				+0.2
1,882,444	-				+0.3
1,882,444	-				+0.1
1,882,444	-				-0.2
1,882,444	-				-0.1
1,882,444	-				-2.0
1,882,488	-				-0.6
1,882,488	-				-0.3
1,882,488	-				-0.3
1,882,488	-				-0.0
1,882,488	-				-0.3
1,882,678	+		Ga0059261_1775	0.22	+0.6
1,882,678	+		Ga0059261_1775	0.22	-0.1
1,882,678	+		Ga0059261_1775	0.22	-0.4
1,882,678	+		Ga0059261_1775	0.22	-0.8
1,882,678	+		Ga0059261_1775	0.22	-0.0
1,882,678	+		Ga0059261_1775	0.22	-1.1
1,882,679	-		Ga0059261_1775	0.22	-0.2
1,882,679	-		Ga0059261_1775	0.22	-1.3
1,882,684	-		Ga0059261_1775	0.23	-0.1
1,882,684	-		Ga0059261_1775	0.23	+1.6
1,882,684	-		Ga0059261_1775	0.23	+0.5
1,882,787	+				-0.6
1,882,787	+		Ga0059261_1775	0.31	-0.4
1,882,787	+				-0.4
1,882,787	+		Ga0059261_1775	0.31	-1.3
1,882,787	+		Ga0059261_1775	0.31	-1.5
1,882,788	-		Ga0059261_1775	0.31	-0.2
1,882,788	-		Ga0059261_1775	0.31	+0.2
1,882,788	-		Ga0059261_1775	0.31	-0.4
1,882,788	-		Ga0059261_1775	0.31	+0.8
1,882,788	-		Ga0059261_1775	0.31	+0.2
1,882,845	+		Ga0059261_1775	0.36	-0.2
1,882,845	+		Ga0059261_1775	0.36	-0.5
1,882,845	+		Ga0059261_1775	0.36	-0.2
1,882,845	+		Ga0059261_1775	0.36	-1.4
1,882,846	-		Ga0059261_1775	0.36	+0.5
1,882,846	-				-0.4
1,882,846	-		Ga0059261_1775	0.36	+1.1
1,882,846	-		Ga0059261_1775	0.36	+0.3
1,882,846	-		Ga0059261_1775	0.36	+0.5
1,882,846	-		Ga0059261_1775	0.36	+0.1
1,882,872	+		Ga0059261_1775	0.39	-0.5
1,882,872	+		Ga0059261_1775	0.39	+0.9
1,882,872	+		Ga0059261_1775	0.39	+0.3
1,882,873	-		Ga0059261_1775	0.39	-0.8
1,882,873	-		Ga0059261_1775	0.39	-0.3
1,882,873	-		Ga0059261_1775	0.39	-0.2
1,882,937	+		Ga0059261_1775	0.44	-0.8
1,882,937	+		Ga0059261_1775	0.44	-0.3
1,882,937	+		Ga0059261_1775	0.44	-0.0
1,882,937	+		Ga0059261_1775	0.44	+0.8
1,882,937	+		Ga0059261_1775	0.44	-0.4
1,882,937	+		Ga0059261_1775	0.44	+0.1
1,882,938	-		Ga0059261_1775	0.44	+1.4
1,882,938	-		Ga0059261_1775	0.44	-0.4
1,882,938	-		Ga0059261_1775	0.44	+0.3
1,882,957	+		Ga0059261_1775	0.46	+0.2
1,882,958	-		Ga0059261_1775	0.46	-0.4
1,882,958	-		Ga0059261_1775	0.46	+0.6
1,883,091	+		Ga0059261_1775	0.57	+1.2
1,883,092	-		Ga0059261_1775	0.57	-0.6
1,883,092	-		Ga0059261_1775	0.57	+0.9
1,883,092	-		Ga0059261_1775	0.57	+0.2
1,883,092	-		Ga0059261_1775	0.57	-0.1
1,883,092	-		Ga0059261_1775	0.57	-0.9
1,883,119	+		Ga0059261_1775	0.60	+0.7
1,883,120	-		Ga0059261_1775	0.60	-0.3
1,883,120	-		Ga0059261_1775	0.60	-1.5
1,883,360	+		Ga0059261_1775	0.80	-0.0
1,883,360	+		Ga0059261_1775	0.80	-0.7
1,883,360	+		Ga0059261_1775	0.80	-0.0
1,883,360	+		Ga0059261_1775	0.80	-0.1
1,883,360	+		Ga0059261_1775	0.80	+0.1
1,883,361	-		Ga0059261_1775	0.80	-0.1
1,883,361	-		Ga0059261_1775	0.80	+0.2
1,883,361	-		Ga0059261_1775	0.80	+0.2
1,883,361	-		Ga0059261_1775	0.80	-0.8
1,883,484	+				-0.0
1,883,484	+				+0.2
1,883,484	+				+0.1
1,883,484	+				-0.2
1,883,484	+				+0.1
1,883,485	-				+1.2
1,883,485	-				+0.5
1,883,485	-				-0.1
1,883,485	-				-0.8
1,883,485	-				+0.5
1,883,485	-				-0.3
1,883,485	-				-2.4
1,883,485	-				+0.3
1,883,543	+				-0.8
1,883,543	+				+1.2
1,883,543	+				+0.2
1,883,543	+				-0.1
1,883,544	-				+0.0
1,883,544	-				-0.3
1,883,600	+				-0.0
1,883,600	+				+0.4
1,883,601	-				-0.8
1,883,601	-				-0.7
1,883,601	-				+1.2
1,883,621	+				-0.4
1,883,621	+				-0.0
1,883,622	-				+0.1
1,883,684	+				+0.3
1,883,684	+				+0.5
1,883,685	-				+0.3
1,883,717	-				-0.4
1,883,739	-				+0.1
1,883,766	+				+1.5
1,883,766	+				-0.6
1,883,767	-				-0.4
1,883,781	+				+0.1
1,883,781	+				-0.4
1,883,781	+				+0.7
1,883,782	-				-0.0
1,883,782	-				-0.5
1,883,782	-				+0.0
1,883,829	-				-0.3
1,883,840	+				-0.3
1,883,840	+				-1.2
1,883,840	+				-0.6
1,883,840	+				+0.2
1,883,840	+				-1.4
1,883,840	+				-0.6
1,883,840	+				-0.2
1,883,840	+				+0.5
1,883,840	+				+0.3
1,883,840	+				+0.6
1,883,841	-				+0.5
1,883,841	-				+0.6
1,883,841	-				+0.7
1,883,841	-				+1.0
1,883,841	-				+0.2
1,883,841	-				-0.6
1,883,850	+				+0.2
1,883,851	-				+0.3
1,884,161	+		Ga0059261_1776	0.27	+0.5
1,884,169	+				+1.2
1,884,169	+				-1.4
1,884,170	-		Ga0059261_1776	0.28	+0.1
1,884,184	+				+1.2
1,884,185	-		Ga0059261_1776	0.29	-0.3
1,884,185	-		Ga0059261_1776	0.29	-0.8
1,884,185	-		Ga0059261_1776	0.29	-0.7
1,884,185	-		Ga0059261_1776	0.29	+0.7
1,884,185	-		Ga0059261_1776	0.29	-0.4
1,884,185	-		Ga0059261_1776	0.29	-0.4
1,884,185	-		Ga0059261_1776	0.29	+0.6
1,884,185	-		Ga0059261_1776	0.29	-0.8
1,884,219	-		Ga0059261_1776	0.33	-0.0
1,884,326	+		Ga0059261_1776	0.43	-0.3
1,884,326	+		Ga0059261_1776	0.43	+1.1
1,884,326	+		Ga0059261_1776	0.43	+0.6
1,884,326	+				+1.2
1,884,326	+		Ga0059261_1776	0.43	-0.0
1,884,327	-		Ga0059261_1776	0.44	-0.3
1,884,327	-		Ga0059261_1776	0.44	+0.5
1,884,327	-		Ga0059261_1776	0.44	-0.0
1,884,354	+		Ga0059261_1776	0.46	-0.6
1,884,355	-		Ga0059261_1776	0.46	-0.6
1,884,355	-		Ga0059261_1776	0.46	+1.2
1,884,412	+		Ga0059261_1776	0.52	+0.7
1,884,412	+		Ga0059261_1776	0.52	-0.2
1,884,412	+		Ga0059261_1776	0.52	-0.3
1,884,413	-		Ga0059261_1776	0.52	-1.0
1,884,413	-		Ga0059261_1776	0.52	-0.7
1,884,454	+		Ga0059261_1776	0.56	+0.2
1,884,454	+		Ga0059261_1776	0.56	-0.5
1,884,455	-		Ga0059261_1776	0.56	-0.6
1,884,455	-		Ga0059261_1776	0.56	+0.3
1,884,455	-		Ga0059261_1776	0.56	+0.1
1,884,455	-		Ga0059261_1776	0.56	+0.6
1,884,578	+		Ga0059261_1776	0.68	+0.6
1,884,578	+		Ga0059261_1776	0.68	-0.1
1,884,578	+		Ga0059261_1776	0.68	+0.3
1,884,579	-		Ga0059261_1776	0.69	+0.0