Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1049

Experiment: 1-ethyl-3-methylimidazolium chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 5 mM
1,081,139	+				-0.6
1,081,139	+				+0.8
1,081,139	+				-0.6
1,081,139	+				+0.4
1,081,139	+				+1.0
1,081,139	+				+0.3
1,081,139	+				+0.2
1,081,139	+				+0.2
1,081,139	+				+0.3
1,081,139	+				+1.0
1,081,140	-				+0.1
1,081,140	-				+0.1
1,081,140	-				-1.0
1,081,140	-				-0.6
1,081,140	-				+0.4
1,081,140	-				-0.7
1,081,140	-				-0.5
1,081,140	-				+1.0
1,081,312	+		Ga0059261_1048	0.15	-0.8
1,081,312	+		Ga0059261_1048	0.15	+0.6
1,081,312	+		Ga0059261_1048	0.15	-0.3
1,081,312	+		Ga0059261_1048	0.15	-1.1
1,081,312	+		Ga0059261_1048	0.15	-0.6
1,081,313	-		Ga0059261_1048	0.15	-0.2
1,081,313	-		Ga0059261_1048	0.15	+0.4
1,081,313	-		Ga0059261_1048	0.15	+1.0
1,081,313	-		Ga0059261_1048	0.15	-0.8
1,081,313	-		Ga0059261_1048	0.15	-0.3
1,081,313	-		Ga0059261_1048	0.15	-0.1
1,081,313	-		Ga0059261_1048	0.15	-0.3
1,081,313	-		Ga0059261_1048	0.15	-0.9
1,081,313	-		Ga0059261_1048	0.15	-0.3
1,081,619	+		Ga0059261_1048	0.55	+1.0
1,081,619	+		Ga0059261_1048	0.55	-0.1
1,081,619	+		Ga0059261_1048	0.55	-0.3
1,081,619	+		Ga0059261_1048	0.55	+0.4
1,081,619	+		Ga0059261_1048	0.55	+0.4
1,081,619	+		Ga0059261_1048	0.55	-0.1
1,081,619	+				+0.6
1,081,619	+		Ga0059261_1048	0.55	-0.6
1,081,619	+		Ga0059261_1048	0.55	+0.2
1,081,620	-		Ga0059261_1048	0.55	-0.2
1,081,620	-		Ga0059261_1048	0.55	-0.4
1,081,620	-		Ga0059261_1048	0.55	-0.0
1,081,620	-		Ga0059261_1048	0.55	-0.1
1,081,620	-		Ga0059261_1048	0.55	-0.2
1,081,620	-		Ga0059261_1048	0.55	+0.1
1,081,620	-		Ga0059261_1048	0.55	+1.2
1,081,620	-		Ga0059261_1048	0.55	-0.7
1,081,620	-		Ga0059261_1048	0.55	+2.0
1,081,620	-		Ga0059261_1048	0.55	+0.4
1,081,620	-		Ga0059261_1048	0.55	-0.4
1,081,623	+		Ga0059261_1048	0.56	+0.6
1,081,623	+		Ga0059261_1048	0.56	-0.0
1,081,623	+		Ga0059261_1048	0.56	-0.4
1,081,623	+		Ga0059261_1048	0.56	-0.0
1,081,623	+		Ga0059261_1048	0.56	-2.4
1,081,624	-		Ga0059261_1048	0.56	+2.0
1,081,624	-		Ga0059261_1048	0.56	-0.1
1,081,624	-		Ga0059261_1048	0.56	-2.7
1,081,624	-		Ga0059261_1048	0.56	+0.4
1,081,624	-		Ga0059261_1048	0.56	+0.0
1,081,744	+		Ga0059261_1048	0.71	-0.1
1,081,744	+		Ga0059261_1048	0.71	+0.7
1,081,745	-		Ga0059261_1048	0.72	+0.7
1,081,745	-		Ga0059261_1048	0.72	-1.1
1,081,745	-				-0.6
1,081,745	-		Ga0059261_1048	0.72	-0.1
1,081,966	+				+0.5
1,081,967	-				+0.3
1,081,972	+				+0.8
1,081,972	+				-0.2
1,081,973	-				-0.2
1,081,973	-				-0.3
1,081,973	-				-0.3
1,081,973	-				-0.8
1,081,995	+				-0.2
1,081,995	+				+0.4
1,082,150	+		Ga0059261_1049	0.24	+0.7
1,082,150	+		Ga0059261_1049	0.24	-1.8
1,082,151	-		Ga0059261_1049	0.25	-0.8
1,082,151	-		Ga0059261_1049	0.25	+0.7
1,082,151	-		Ga0059261_1049	0.25	-0.6
1,082,211	+		Ga0059261_1049	0.47	-1.2
1,082,211	+		Ga0059261_1049	0.47	+0.6
1,082,211	+		Ga0059261_1049	0.47	+0.9
1,082,212	-		Ga0059261_1049	0.48	+1.5
1,082,212	-		Ga0059261_1049	0.48	+0.3
1,082,212	-		Ga0059261_1049	0.48	+0.7
1,082,212	-		Ga0059261_1049	0.48	-0.0
1,082,212	-		Ga0059261_1049	0.48	-0.7
1,082,232	+		Ga0059261_1049	0.55	-0.0
1,082,347	+				+0.3
1,082,347	+				+1.7
1,082,347	+				+0.5
1,082,347	+				-1.3
1,082,348	-				+0.1
1,082,379	+				+0.3
1,082,379	+				+0.2
1,082,380	-				-0.0
1,082,380	-				+0.7
1,082,380	-				-0.4
1,082,468	+		Ga0059261_1050	0.42	-0.3
1,082,469	-		Ga0059261_1050	0.43	-1.2
1,082,469	-		Ga0059261_1050	0.43	+0.9
1,082,617	+				-0.6
1,082,617	+				-0.0
1,082,618	-				+0.1
1,082,678	+		Ga0059261_1051	0.22	+0.5
1,082,678	+		Ga0059261_1051	0.22	-0.4
1,082,678	+		Ga0059261_1051	0.22	-0.4
1,082,678	+		Ga0059261_1051	0.22	-0.7
1,082,678	+		Ga0059261_1051	0.22	-0.5
1,082,678	+		Ga0059261_1051	0.22	+1.0
1,082,678	+		Ga0059261_1051	0.22	+0.2
1,082,678	+		Ga0059261_1051	0.22	-0.3
1,082,678	+		Ga0059261_1051	0.22	+0.6
1,082,678	+		Ga0059261_1051	0.22	+0.5
1,082,679	-		Ga0059261_1051	0.23	-0.0
1,082,679	-		Ga0059261_1051	0.23	+0.1
1,082,679	-		Ga0059261_1051	0.23	-1.3
1,082,679	-		Ga0059261_1051	0.23	+0.1
1,082,679	-		Ga0059261_1051	0.23	-0.7
1,082,679	-		Ga0059261_1051	0.23	+0.4
1,082,679	-		Ga0059261_1051	0.23	-0.6
1,082,679	-		Ga0059261_1051	0.23	-0.0
1,082,679	-		Ga0059261_1051	0.23	-0.2
1,082,679	-		Ga0059261_1051	0.23	-0.7
1,082,679	-		Ga0059261_1051	0.23	+0.5
1,082,943	+				-0.0
1,082,943	+				-0.4
1,083,003	+		Ga0059261_1052	0.22	+0.2
1,083,003	+		Ga0059261_1052	0.22	-1.0
1,083,015	+		Ga0059261_1052	0.25	-0.7
1,083,016	-		Ga0059261_1052	0.26	+0.2
1,083,016	-		Ga0059261_1052	0.26	-0.7
1,083,016	-		Ga0059261_1052	0.26	+1.4
1,083,084	+		Ga0059261_1052	0.44	+0.4
1,083,084	+		Ga0059261_1052	0.44	+0.2
1,083,084	+		Ga0059261_1052	0.44	+1.0
1,083,084	+		Ga0059261_1052	0.44	-0.2
1,083,084	+		Ga0059261_1052	0.44	-0.6
1,083,084	+		Ga0059261_1052	0.44	+0.3
1,083,084	+		Ga0059261_1052	0.44	+0.3
1,083,084	+		Ga0059261_1052	0.44	+0.0
1,083,084	+		Ga0059261_1052	0.44	-0.8
1,083,084	+		Ga0059261_1052	0.44	-0.2
1,083,085	-				-0.0
1,083,085	-		Ga0059261_1052	0.44	+0.4
1,083,085	-		Ga0059261_1052	0.44	+0.2
1,083,085	-		Ga0059261_1052	0.44	+0.1
1,083,085	-		Ga0059261_1052	0.44	-0.5
1,083,085	-		Ga0059261_1052	0.44	+0.5
1,083,085	-		Ga0059261_1052	0.44	+0.6
1,083,085	-		Ga0059261_1052	0.44	+2.2
1,083,085	-		Ga0059261_1052	0.44	+0.1
1,083,085	-		Ga0059261_1052	0.44	-0.4
1,083,085	-		Ga0059261_1052	0.44	+0.1
1,083,085	-		Ga0059261_1052	0.44	+0.3
1,083,182	-		Ga0059261_1052	0.70	-0.5
1,083,182	-		Ga0059261_1052	0.70	-0.7
1,083,235	+		Ga0059261_1052	0.84	+0.2
1,083,235	+		Ga0059261_1052	0.84	-0.5
1,083,236	-		Ga0059261_1052	0.84	-0.5
1,083,236	-		Ga0059261_1052	0.84	-0.5
1,083,236	-		Ga0059261_1052	0.84	+0.4
1,083,248	+		Ga0059261_1052	0.87	-0.6
1,083,248	+		Ga0059261_1052	0.87	-0.0
1,083,249	-		Ga0059261_1052	0.87	+0.2
1,083,249	-		Ga0059261_1052	0.87	-0.1
1,083,254	+		Ga0059261_1052	0.89	-0.5
1,083,254	+		Ga0059261_1052	0.89	+1.0
1,083,254	+		Ga0059261_1052	0.89	+0.3
1,083,254	+		Ga0059261_1052	0.89	-0.2
1,083,254	+		Ga0059261_1052	0.89	+0.1
1,083,254	+		Ga0059261_1052	0.89	-0.3
1,083,254	+		Ga0059261_1052	0.89	+0.1
1,083,254	+		Ga0059261_1052	0.89	-1.7
1,083,254	+		Ga0059261_1052	0.89	+0.1
1,083,254	+		Ga0059261_1052	0.89	-0.2
1,083,254	+		Ga0059261_1052	0.89	-0.3
1,083,254	+		Ga0059261_1052	0.89	-0.4
1,083,255	-		Ga0059261_1052	0.89	+0.2
1,083,255	-		Ga0059261_1052	0.89	+1.6
1,083,255	-		Ga0059261_1052	0.89	-0.5
1,083,255	-		Ga0059261_1052	0.89	-0.3
1,083,255	-		Ga0059261_1052	0.89	-0.9
1,083,255	-		Ga0059261_1052	0.89	-0.4
1,083,255	-		Ga0059261_1052	0.89	+0.4
1,083,255	-		Ga0059261_1052	0.89	+0.0
1,083,295	-				+0.4
1,083,295	-				+0.2