Experiment: 1-ethyl-3-methylimidazolium chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0057 and Ga0059261_0058 are separated by 41 nucleotides Ga0059261_0058 and Ga0059261_0059 are separated by 15 nucleotides Ga0059261_0059 and Ga0059261_0060 are separated by 2 nucleotides Ga0059261_0060 and Ga0059261_0061 are separated by 147 nucleotides
Ga0059261_0057: Ga0059261_0057 - Glycosyltransferase, at 51,062 to 52,420
_0057
Ga0059261_0058: Ga0059261_0058 - monothiol glutaredoxin, Grx4 family, at 52,462 to 52,791
_0058
Ga0059261_0059: Ga0059261_0059 - Stress-induced morphogen (activity unknown), at 52,807 to 53,049
_0059
Ga0059261_0060: Ga0059261_0060 - Uncharacterized conserved protein, at 53,052 to 53,375
_0060
Ga0059261_0061: Ga0059261_0061 - nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19), at 53,523 to 54,368
_0061
Position (kb) 53
54 Strain fitness (log2 ratio) -2
-1
0
1 at 52.107 kb on + strand, within Ga0059261_0057 at 52.107 kb on + strand, within Ga0059261_0057 at 52.201 kb on + strand, within Ga0059261_0057 at 52.201 kb on + strand, within Ga0059261_0057 at 52.201 kb on + strand, within Ga0059261_0057 at 52.201 kb on + strand, within Ga0059261_0057 at 52.201 kb on + strand, within Ga0059261_0057 at 52.201 kb on + strand, within Ga0059261_0057 at 52.201 kb on + strand, within Ga0059261_0057 at 52.201 kb on + strand, within Ga0059261_0057 at 52.201 kb on + strand, within Ga0059261_0057 at 52.202 kb on - strand, within Ga0059261_0057 at 52.202 kb on - strand, within Ga0059261_0057 at 52.202 kb on - strand, within Ga0059261_0057 at 52.202 kb on - strand, within Ga0059261_0057 at 52.281 kb on + strand, within Ga0059261_0057 at 52.281 kb on + strand, within Ga0059261_0057 at 52.282 kb on - strand, within Ga0059261_0057 at 52.282 kb on - strand, within Ga0059261_0057 at 52.282 kb on - strand, within Ga0059261_0057 at 52.282 kb on - strand, within Ga0059261_0057 at 52.282 kb on - strand, within Ga0059261_0057 at 52.282 kb on - strand, within Ga0059261_0057 at 52.282 kb on - strand, within Ga0059261_0057 at 52.282 kb on - strand, within Ga0059261_0057 at 52.302 kb on + strand at 52.302 kb on + strand at 52.302 kb on + strand at 52.302 kb on + strand at 52.303 kb on - strand at 52.303 kb on - strand at 52.303 kb on - strand at 52.303 kb on - strand at 52.335 kb on + strand at 52.336 kb on - strand at 52.336 kb on - strand at 52.336 kb on - strand at 52.336 kb on - strand at 52.423 kb on + strand at 52.423 kb on + strand at 52.423 kb on + strand at 52.423 kb on + strand at 52.423 kb on + strand at 52.423 kb on + strand at 52.424 kb on - strand at 52.424 kb on - strand at 52.424 kb on - strand at 52.424 kb on - strand at 52.424 kb on - strand at 52.428 kb on + strand at 52.428 kb on + strand at 52.429 kb on - strand at 52.429 kb on - strand at 52.429 kb on - strand at 52.436 kb on - strand at 52.436 kb on - strand at 52.887 kb on - strand, within Ga0059261_0059 at 52.887 kb on - strand, within Ga0059261_0059 at 52.887 kb on - strand, within Ga0059261_0059 at 52.953 kb on - strand, within Ga0059261_0059 at 53.053 kb on + strand at 53.054 kb on - strand at 53.054 kb on - strand at 53.225 kb on - strand, within Ga0059261_0060 at 53.225 kb on - strand, within Ga0059261_0060 at 53.225 kb on - strand, within Ga0059261_0060 at 53.225 kb on - strand, within Ga0059261_0060 at 53.225 kb on - strand, within Ga0059261_0060 at 53.410 kb on + strand at 53.410 kb on + strand at 53.411 kb on - strand at 53.411 kb on - strand at 53.411 kb on - strand at 53.411 kb on - strand at 53.411 kb on - strand at 53.489 kb on + strand at 53.491 kb on + strand at 53.491 kb on + strand at 53.491 kb on + strand at 54.373 kb on + strand at 54.373 kb on + strand at 54.373 kb on + strand at 54.374 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1-ethyl-3-methylimidazolium chloride 5 mM remove 52,107 + Ga0059261_0057 0.77 +0.3 52,107 + Ga0059261_0057 0.77 -0.3 52,201 + Ga0059261_0057 0.84 +0.4 52,201 + Ga0059261_0057 0.84 -0.1 52,201 + Ga0059261_0057 0.84 +0.4 52,201 + Ga0059261_0057 0.84 -0.6 52,201 + Ga0059261_0057 0.84 +1.7 52,201 + Ga0059261_0057 0.84 +0.8 52,201 + Ga0059261_0057 0.84 -0.9 52,201 + Ga0059261_0057 0.84 -0.7 52,201 + Ga0059261_0057 0.84 +0.6 52,202 - Ga0059261_0057 0.84 -0.9 52,202 - Ga0059261_0057 0.84 -0.2 52,202 - Ga0059261_0057 0.84 -0.1 52,202 - Ga0059261_0057 0.84 -0.9 52,281 + Ga0059261_0057 0.90 -0.2 52,281 + Ga0059261_0057 0.90 -0.6 52,282 - Ga0059261_0057 0.90 +0.3 52,282 - Ga0059261_0057 0.90 -0.1 52,282 - Ga0059261_0057 0.90 +0.6 52,282 - Ga0059261_0057 0.90 +0.9 52,282 - Ga0059261_0057 0.90 +0.4 52,282 - Ga0059261_0057 0.90 +0.2 52,282 - Ga0059261_0057 0.90 -0.4 52,282 - Ga0059261_0057 0.90 +0.9 52,302 + +0.6 52,302 + +0.0 52,302 + +1.5 52,302 + +0.1 52,303 - +0.1 52,303 - -0.3 52,303 - -0.2 52,303 - -0.3 52,335 + +0.3 52,336 - +0.2 52,336 - -0.1 52,336 - -1.4 52,336 - -0.3 52,423 + +0.6 52,423 + -0.1 52,423 + +0.9 52,423 + -0.1 52,423 + -0.1 52,423 + -0.9 52,424 - +0.5 52,424 - +0.2 52,424 - +0.2 52,424 - +1.5 52,424 - +0.7 52,428 + -0.6 52,428 + -0.1 52,429 - -0.1 52,429 - +0.4 52,429 - -0.4 52,436 - +0.1 52,436 - -0.1 52,887 - Ga0059261_0059 0.33 +0.1 52,887 - Ga0059261_0059 0.33 -0.1 52,887 - Ga0059261_0059 0.33 +0.6 52,953 - Ga0059261_0059 0.60 -0.4 53,053 + -1.2 53,054 - +0.5 53,054 - -0.3 53,225 - Ga0059261_0060 0.53 +0.0 53,225 - Ga0059261_0060 0.53 +0.9 53,225 - Ga0059261_0060 0.53 +0.8 53,225 - Ga0059261_0060 0.53 -0.1 53,225 - Ga0059261_0060 0.53 -0.2 53,410 + +0.3 53,410 + -1.1 53,411 - -0.2 53,411 - -0.8 53,411 - -1.1 53,411 - -0.8 53,411 - +0.8 53,489 + -1.8 53,491 + +0.5 53,491 + -0.8 53,491 + +0.6 54,373 + -0.3 54,373 + +0.4 54,373 + +0.9 54,374 - -0.1
Or see this region's nucleotide sequence