Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS25375

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
6,165,250	+		CA265_RS25370	0.17	+1.4
6,165,251	-		CA265_RS25370	0.18	-1.7
6,165,253	-		CA265_RS25370	0.18	-0.1
6,165,253	-		CA265_RS25370	0.18	+0.1
6,165,259	+		CA265_RS25370	0.18	+1.7
6,165,260	-		CA265_RS25370	0.18	+0.6
6,165,260	-		CA265_RS25370	0.18	+0.5
6,165,298	-		CA265_RS25370	0.22	-0.9
6,165,518	+		CA265_RS25370	0.42	+1.3
6,165,518	+		CA265_RS25370	0.42	+1.7
6,165,519	-		CA265_RS25370	0.42	+0.3
6,165,519	-		CA265_RS25370	0.42	-0.8
6,165,521	+		CA265_RS25370	0.42	+0.9
6,165,521	+		CA265_RS25370	0.42	+1.2
6,165,589	-		CA265_RS25370	0.48	-0.1
6,165,666	+		CA265_RS25370	0.55	+0.3
6,165,666	+		CA265_RS25370	0.55	+1.2
6,165,732	-		CA265_RS25370	0.61	+0.8
6,165,740	+		CA265_RS25370	0.62	+1.0
6,165,740	+		CA265_RS25370	0.62	+1.2
6,165,808	+		CA265_RS25370	0.68	+1.8
6,165,809	-		CA265_RS25370	0.68	-0.3
6,165,820	+		CA265_RS25370	0.69	+2.0
6,165,821	-		CA265_RS25370	0.69	-0.1
6,165,879	+		CA265_RS25370	0.75	+2.0
6,165,879	+		CA265_RS25370	0.75	+1.4
6,165,880	-		CA265_RS25370	0.75	-0.2
6,165,894	-		CA265_RS25370	0.76	-0.5
6,165,897	-		CA265_RS25370	0.76	-0.6
6,165,899	+		CA265_RS25370	0.77	+2.1
6,165,968	+		CA265_RS25370	0.83	+1.8
6,165,969	-		CA265_RS25370	0.83	-0.3
6,165,969	-		CA265_RS25370	0.83	-0.6
6,165,992	+		CA265_RS25370	0.85	-0.6
6,166,077	-				-0.7
6,166,090	-				-0.4
6,166,153	+				+2.4
6,166,181	-				+0.3
6,166,239	+		CA265_RS25375	0.17	-0.4
6,166,324	+		CA265_RS25375	0.29	+0.4
6,166,342	+		CA265_RS25375	0.32	+1.7
6,166,400	+		CA265_RS25375	0.41	+0.6
6,166,408	-		CA265_RS25375	0.42	-2.0
6,166,411	-		CA265_RS25375	0.42	-0.5
6,166,454	-		CA265_RS25375	0.49	-0.4
6,166,553	+		CA265_RS25375	0.63	-0.5
6,166,562	-		CA265_RS25375	0.65	+0.5
6,166,687	-		CA265_RS25375	0.83	+0.6
6,166,716	+		CA265_RS25375	0.88	+1.1
6,166,717	-		CA265_RS25375	0.88	-0.0
6,166,748	-				+0.3
6,166,748	-				+0.3
6,166,766	-				+0.9
6,167,036	+				-0.1
6,167,055	+		CA265_RS25385	0.12	+0.1
6,167,091	+		CA265_RS25385	0.25	+0.1
6,167,132	+		CA265_RS25385	0.40	+0.8
6,167,132	+		CA265_RS25385	0.40	+0.9
6,167,231	+		CA265_RS25385	0.75	-0.0
6,167,231	+		CA265_RS25385	0.75	-0.3
6,167,233	+		CA265_RS25385	0.76	+1.1
6,167,256	+		CA265_RS25385	0.84	-0.1