Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS24425

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
5,948,570	-		CA265_RS24420	0.55	-0.8
5,948,572	-		CA265_RS24420	0.55	-0.8
5,948,784	+		CA265_RS24420	0.68	+1.1
5,948,784	+		CA265_RS24420	0.68	-1.1
5,948,945	-		CA265_RS24420	0.79	+0.3
5,948,945	-		CA265_RS24420	0.79	-0.6
5,948,951	+		CA265_RS24420	0.79	+2.1
5,948,951	+		CA265_RS24420	0.79	+2.5
5,948,952	-		CA265_RS24420	0.79	+1.5
5,948,999	-		CA265_RS24420	0.82	-0.7
5,948,999	-		CA265_RS24420	0.82	-0.6
5,948,999	-		CA265_RS24420	0.82	-0.4
5,948,999	-		CA265_RS24420	0.82	-0.4
5,949,132	+				+0.2
5,949,174	+				-0.3
5,949,175	-				-0.7
5,949,178	-				-0.2
5,949,218	+				+0.5
5,949,278	-				+0.5
5,949,425	+				-0.2
5,949,442	+				-1.0
5,949,564	-				-1.8
5,949,564	-				+0.6
5,949,643	-				-0.8
5,949,749	+				+0.2
5,949,767	+				-0.8
5,949,783	-				-2.1
5,949,910	-				-0.1
5,950,019	-				-0.6
5,950,094	+				+0.0
5,950,097	+				-0.1
5,950,260	-		CA265_RS24430	0.29	-0.5
5,950,272	+		CA265_RS24430	0.31	-1.1
5,950,288	-		CA265_RS24430	0.33	-0.8
5,950,463	+		CA265_RS24430	0.62	+0.8
5,950,464	-		CA265_RS24430	0.62	-0.1
5,950,482	+		CA265_RS24430	0.65	+0.5
5,950,540	+		CA265_RS24430	0.74	-1.6
5,950,541	-		CA265_RS24430	0.74	-0.6
5,950,541	-		CA265_RS24430	0.74	-1.4
5,950,543	-		CA265_RS24430	0.75	-0.4