Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18770

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
4,670,390	-		CA265_RS18760	0.84	-2.0
4,670,393	+		CA265_RS18760	0.85	-1.0
4,670,399	+		CA265_RS18760	0.85	-0.6
4,670,442	+				-3.3
4,670,443	-				-1.6
4,670,498	+				-1.6
4,670,498	+				+1.2
4,670,502	+				+1.8
4,670,502	+				+0.8
4,670,523	-				+0.7
4,670,530	+				-1.3
4,670,537	-				-1.0
4,670,611	-				+1.3
4,670,661	+				+0.3
4,670,680	+				-0.3
4,670,712	+				-0.5
4,670,721	+				+0.3
4,670,749	+		CA265_RS18765	0.13	-0.4
4,670,771	+		CA265_RS18765	0.16	-1.1
4,670,792	-		CA265_RS18765	0.19	+0.4
4,670,838	+		CA265_RS18765	0.25	-1.8
4,670,839	-		CA265_RS18765	0.25	+0.1
4,670,918	+		CA265_RS18765	0.36	+0.1
4,670,923	+		CA265_RS18765	0.37	-0.2
4,670,925	+		CA265_RS18765	0.37	+0.5
4,670,926	-		CA265_RS18765	0.37	+0.6
4,670,926	-		CA265_RS18765	0.37	+0.5
4,670,926	-		CA265_RS18765	0.37	+0.6
4,670,957	+		CA265_RS18765	0.42	-0.8
4,670,983	-		CA265_RS18765	0.45	-1.5
4,670,983	-		CA265_RS18765	0.45	-1.2
4,670,983	-		CA265_RS18765	0.45	+1.1
4,671,011	-		CA265_RS18765	0.49	+0.9
4,671,053	+		CA265_RS18765	0.55	+1.3
4,671,053	+		CA265_RS18765	0.55	+0.8
4,671,068	-		CA265_RS18765	0.57	+1.8
4,671,070	+		CA265_RS18765	0.58	-0.0
4,671,120	-		CA265_RS18765	0.65	+0.7
4,671,146	-		CA265_RS18765	0.68	+2.8
4,671,161	-		CA265_RS18765	0.70	+0.8
4,671,246	-		CA265_RS18765	0.82	+0.1
4,671,296	-		CA265_RS18765	0.89	+0.5
4,671,345	-				+0.9
4,671,398	+				+1.2
4,671,398	+				+0.3
4,671,399	-				+4.8
4,671,399	-				+3.9
4,671,399	-				+4.4
4,671,399	-				+4.6
4,671,399	-				+4.4
4,671,431	-				+4.0
4,671,431	-				+4.7
4,671,446	-		CA265_RS18770	0.10	+2.0
4,671,458	+		CA265_RS18770	0.12	+0.4
4,671,458	+		CA265_RS18770	0.12	+1.0
4,671,462	-		CA265_RS18770	0.12	+3.9
4,671,595	+		CA265_RS18770	0.32	+0.8
4,671,596	-		CA265_RS18770	0.32	+4.7
4,671,688	-		CA265_RS18770	0.46	+4.1
4,671,699	-		CA265_RS18770	0.47	+3.6
4,671,706	+		CA265_RS18770	0.48	+0.1
4,671,815	-		CA265_RS18770	0.64	+1.6
4,671,840	-		CA265_RS18770	0.68	+2.7
4,671,906	+		CA265_RS18770	0.78	+0.6
4,671,907	-		CA265_RS18770	0.78	+3.6
4,671,966	-		CA265_RS18770	0.87	+3.5
4,672,045	-				+3.7
4,672,114	-				+4.1
4,672,148	-				+3.3
4,672,223	-				+3.1
4,672,262	-				+3.3
4,672,393	-		CA265_RS18775	0.11	+3.6
4,672,401	+		CA265_RS18775	0.13	+0.3
4,672,401	+		CA265_RS18775	0.13	-1.3
4,672,401	+		CA265_RS18775	0.13	-0.0
4,672,537	+		CA265_RS18775	0.31	-0.7
4,672,539	+		CA265_RS18775	0.31	-1.7
4,672,547	+		CA265_RS18775	0.33	+0.4
4,672,547	+		CA265_RS18775	0.33	-0.4
4,672,547	+		CA265_RS18775	0.33	-0.4
4,672,814	-		CA265_RS18775	0.69	+0.1
4,672,814	-		CA265_RS18775	0.69	-0.8
4,672,814	-		CA265_RS18775	0.69	+1.7
4,672,859	+		CA265_RS18775	0.75	-0.7
4,672,940	+		CA265_RS18775	0.86	+0.6
4,673,010	+				+0.9
4,673,011	-				-0.3
4,673,047	-				+0.2