Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18140

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
4,526,844	-				+1.1
4,526,891	-				+0.1
4,526,929	-				+0.2
4,526,954	-				+0.3
4,527,044	-				-2.1
4,527,055	-				+2.1
4,527,274	-		CA265_RS18135	0.30	+2.5
4,527,385	+		CA265_RS18135	0.44	+3.1
4,527,415	-		CA265_RS18135	0.48	+1.6
4,527,482	-		CA265_RS18135	0.57	+3.6
4,527,482	-		CA265_RS18135	0.57	+0.3
4,527,636	-		CA265_RS18135	0.77	+2.1
4,527,829	-				+3.4
4,527,845	-				+3.8
4,527,913	+				+4.1
4,527,919	+				+1.2
4,527,926	+		CA265_RS18140	0.10	+1.1
4,527,947	+		CA265_RS18140	0.12	+2.3
4,527,997	-		CA265_RS18140	0.17	+3.0
4,528,012	+		CA265_RS18140	0.19	+1.1
4,528,178	-		CA265_RS18140	0.36	+2.8
4,528,178	-		CA265_RS18140	0.36	+2.3
4,528,188	-		CA265_RS18140	0.37	+2.1
4,528,189	+		CA265_RS18140	0.37	+1.7
4,528,189	+		CA265_RS18140	0.37	+0.5
4,528,189	+		CA265_RS18140	0.37	+1.5
4,528,224	+		CA265_RS18140	0.41	+2.3
4,528,224	+		CA265_RS18140	0.41	+1.8
4,528,225	-		CA265_RS18140	0.41	+3.3
4,528,336	+		CA265_RS18140	0.52	+2.3
4,528,343	+		CA265_RS18140	0.53	+2.1
4,528,430	-		CA265_RS18140	0.62	+1.6
4,528,518	+		CA265_RS18140	0.71	+1.9
4,528,518	+		CA265_RS18140	0.71	+1.9
4,528,519	-		CA265_RS18140	0.71	+3.5
4,528,607	-		CA265_RS18140	0.80	+2.3
4,528,686	+		CA265_RS18140	0.88	+0.9
4,528,693	+		CA265_RS18140	0.89	+0.7
4,528,694	-		CA265_RS18140	0.89	+4.7
4,528,721	-				+1.8
4,528,752	-				+1.8
4,528,810	-				+0.0
4,528,908	+				-0.2
4,528,924	+				+0.0
4,528,927	+				-0.6
4,529,046	-		CA265_RS18145	0.51	-1.1
4,529,081	+		CA265_RS18145	0.67	+1.0
4,529,122	+		CA265_RS18145	0.85	+0.3
4,529,122	+		CA265_RS18145	0.85	+0.4
4,529,130	+		CA265_RS18145	0.88	-0.2
4,529,131	-		CA265_RS18145	0.89	-0.3
4,529,176	+				-0.7
4,529,181	-				-0.2
4,529,189	+				-0.5
4,529,208	+				+0.2
4,529,209	-				-0.1
4,529,214	-				+0.4
4,529,219	+				+0.6
4,529,219	+				+0.1
4,529,220	-				+0.2
4,529,220	-				+0.3
4,529,220	-				-0.5
4,529,222	-				+0.5
4,529,253	-				+0.0
4,529,256	+				-0.2
4,529,275	-				-0.1
4,529,311	-				+0.2
4,529,399	-		CA265_RS18150	0.13	-0.4
4,529,441	+		CA265_RS18150	0.19	-1.4
4,529,446	+		CA265_RS18150	0.20	+0.8
4,529,446	+		CA265_RS18150	0.20	-0.4
4,529,462	+		CA265_RS18150	0.22	-0.2
4,529,462	+		CA265_RS18150	0.22	+0.1
4,529,473	+		CA265_RS18150	0.24	-0.3
4,529,474	-		CA265_RS18150	0.24	+0.8
4,529,479	-		CA265_RS18150	0.25	+0.0
4,529,482	+		CA265_RS18150	0.25	-0.2
4,529,482	+		CA265_RS18150	0.25	+1.1
4,529,537	-		CA265_RS18150	0.33	-2.0
4,529,552	-		CA265_RS18150	0.36	+0.5
4,529,552	-		CA265_RS18150	0.36	+0.7
4,529,555	+		CA265_RS18150	0.36	-0.1
4,529,556	-		CA265_RS18150	0.36	-0.1
4,529,588	+		CA265_RS18150	0.41	+0.9
4,529,589	-		CA265_RS18150	0.41	-0.2
4,529,589	-		CA265_RS18150	0.41	-2.2
4,529,589	-		CA265_RS18150	0.41	-0.2
4,529,589	-		CA265_RS18150	0.41	-0.9
4,529,590	+		CA265_RS18150	0.41	+0.1
4,529,590	+		CA265_RS18150	0.41	+0.3
4,529,590	+		CA265_RS18150	0.41	-0.7
4,529,591	-		CA265_RS18150	0.41	+0.1
4,529,591	-		CA265_RS18150	0.41	-0.1
4,529,591	-		CA265_RS18150	0.41	-0.5
4,529,592	+		CA265_RS18150	0.42	+0.4
4,529,592	+		CA265_RS18150	0.42	+0.4
4,529,702	+		CA265_RS18150	0.58	+1.1
4,529,703	-		CA265_RS18150	0.58	-0.2
4,529,721	+		CA265_RS18150	0.60	+1.8
4,529,752	+		CA265_RS18150	0.65	+1.0
4,529,775	-		CA265_RS18150	0.68	+0.5