Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15500

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
3,896,119	-		CA265_RS15490	0.88	+1.3
3,896,250	+				-1.0
3,896,283	-				-0.8
3,896,303	+				+0.9
3,896,303	+				-0.3
3,896,307	+				+0.3
3,896,310	-				-0.5
3,896,378	+				-0.3
3,896,500	-		CA265_RS15495	0.17	-1.4
3,896,637	-		CA265_RS15495	0.36	-0.2
3,896,663	-		CA265_RS15495	0.40	+2.5
3,896,689	-		CA265_RS15495	0.43	-0.9
3,896,806	+		CA265_RS15495	0.60	+0.7
3,896,806	+		CA265_RS15495	0.60	-1.2
3,896,814	+		CA265_RS15495	0.61	-1.9
3,896,814	+		CA265_RS15495	0.61	-0.6
3,896,815	-		CA265_RS15495	0.61	-0.7
3,896,815	-		CA265_RS15495	0.61	-0.6
3,896,849	+		CA265_RS15495	0.66	+0.9
3,896,854	-		CA265_RS15495	0.66	-0.1
3,896,854	-		CA265_RS15495	0.66	-0.2
3,896,860	-		CA265_RS15495	0.67	-0.4
3,897,031	-				-0.1
3,897,053	-				-0.8
3,897,053	-				+0.0
3,897,053	-				-0.4
3,897,054	+				-0.3
3,897,054	+				+0.3
3,897,055	-				-0.8
3,897,056	+				-2.0
3,897,057	-				+0.1
3,897,169	-		CA265_RS15500	0.14	+0.4
3,897,169	-		CA265_RS15500	0.14	-0.0
3,897,214	-		CA265_RS15500	0.25	-0.5
3,897,348	+		CA265_RS15500	0.58	-0.3
3,897,348	+		CA265_RS15500	0.58	-0.8
3,897,348	+		CA265_RS15500	0.58	-0.1
3,897,348	+		CA265_RS15500	0.58	-0.6
3,897,362	+		CA265_RS15500	0.61	-0.3
3,897,484	+				-1.7
3,897,484	+				-1.9
3,897,535	-				-0.7
3,897,542	-				+0.1
3,897,563	+				-0.1
3,897,563	+				-0.7
3,897,631	+				+0.4
3,897,632	-				-0.9
3,897,749	-		CA265_RS15505	0.11	-1.8
3,897,749	-		CA265_RS15505	0.11	+0.5
3,897,753	+		CA265_RS15505	0.11	-0.5
3,897,754	-		CA265_RS15505	0.11	+0.6
3,897,788	+		CA265_RS15505	0.14	-0.7
3,897,789	-		CA265_RS15505	0.14	-0.3
3,897,934	+		CA265_RS15505	0.23	+0.4
3,897,977	+		CA265_RS15505	0.25	+1.0
3,898,029	-		CA265_RS15505	0.28	-1.4
3,898,051	+		CA265_RS15505	0.30	+0.8
3,898,074	-		CA265_RS15505	0.31	-0.1
3,898,078	-		CA265_RS15505	0.32	-1.7
3,898,078	-		CA265_RS15505	0.32	-0.7
3,898,078	-		CA265_RS15505	0.32	+0.3
3,898,119	+		CA265_RS15505	0.34	+1.5
3,898,156	+		CA265_RS15505	0.36	+0.0
3,898,157	-		CA265_RS15505	0.36	-0.3
3,898,158	+		CA265_RS15505	0.36	-0.2
3,898,178	-		CA265_RS15505	0.38	-0.3
3,898,196	+		CA265_RS15505	0.39	+0.0
3,898,198	+		CA265_RS15505	0.39	+0.9
3,898,220	-		CA265_RS15505	0.40	-0.4
3,898,220	-		CA265_RS15505	0.40	-1.5
3,898,240	-		CA265_RS15505	0.42	-0.8
3,898,249	-		CA265_RS15505	0.42	-0.3
3,898,292	+				+1.9
3,898,314	+		CA265_RS15505	0.46	+0.3
3,898,360	+		CA265_RS15505	0.49	+0.2
3,898,360	+		CA265_RS15505	0.49	+1.8
3,898,365	-		CA265_RS15505	0.49	-1.8