Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15215

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
3,826,771	+		CA265_RS15205	0.88	-1.5
3,826,772	-		CA265_RS15205	0.88	-1.4
3,826,830	-				-1.5
3,826,879	+				+0.9
3,826,964	+				+0.7
3,826,964	+				+1.6
3,826,965	-				-0.6
3,827,020	-				-1.9
3,827,031	+		CA265_RS15210	0.11	-0.7
3,827,032	-		CA265_RS15210	0.11	-0.9
3,827,076	-		CA265_RS15210	0.18	-1.0
3,827,082	-		CA265_RS15210	0.18	-0.6
3,827,153	+		CA265_RS15210	0.29	-1.8
3,827,223	+		CA265_RS15210	0.39	-1.8
3,827,251	+		CA265_RS15210	0.43	-1.5
3,827,292	+		CA265_RS15210	0.49	-1.2
3,827,349	+		CA265_RS15210	0.58	-0.8
3,827,508	-		CA265_RS15210	0.81	-0.4
3,827,625	+				-0.6
3,827,687	+				-0.0
3,827,705	-				-0.1
3,827,746	-				+0.0
3,827,797	-				-0.8
3,827,811	-				+0.2
3,827,858	-				+0.8
3,827,953	+		CA265_RS15215	0.14	+0.5
3,827,984	+		CA265_RS15215	0.16	-0.5
3,828,003	-		CA265_RS15215	0.18	-1.2
3,828,041	+		CA265_RS15215	0.21	-1.7
3,828,052	+		CA265_RS15215	0.22	-0.7
3,828,053	-		CA265_RS15215	0.22	-0.7
3,828,083	+		CA265_RS15215	0.24	-1.0
3,828,198	+		CA265_RS15215	0.33	+0.1
3,828,199	-		CA265_RS15215	0.33	-0.1
3,828,212	-		CA265_RS15215	0.34	-1.5
3,828,212	-		CA265_RS15215	0.34	+0.1
3,828,251	+		CA265_RS15215	0.37	-0.8
3,828,252	-		CA265_RS15215	0.37	-0.4
3,828,252	-		CA265_RS15215	0.37	+2.0
3,828,330	+		CA265_RS15215	0.43	-0.6
3,828,337	-		CA265_RS15215	0.44	+0.2
3,828,409	+		CA265_RS15215	0.49	-0.9
3,828,410	-		CA265_RS15215	0.49	+0.3
3,828,410	-		CA265_RS15215	0.49	-0.7
3,828,440	+		CA265_RS15215	0.51	-0.5
3,828,441	-		CA265_RS15215	0.51	-0.9
3,828,441	-				+1.5
3,828,464	-		CA265_RS15215	0.53	-0.9
3,828,464	-		CA265_RS15215	0.53	+0.0
3,828,464	-		CA265_RS15215	0.53	+0.6
3,828,484	+		CA265_RS15215	0.55	+0.8
3,828,485	-		CA265_RS15215	0.55	-1.4
3,828,521	+		CA265_RS15215	0.58	-0.3
3,828,522	-		CA265_RS15215	0.58	-0.6
3,828,548	-		CA265_RS15215	0.60	+0.1
3,828,549	+		CA265_RS15215	0.60	-0.2
3,828,549	+		CA265_RS15215	0.60	+1.5
3,828,550	-		CA265_RS15215	0.60	+0.9
3,828,550	-		CA265_RS15215	0.60	-0.9
3,828,568	+		CA265_RS15215	0.61	+0.4
3,828,650	+		CA265_RS15215	0.68	-0.4
3,828,720	+		CA265_RS15215	0.73	-1.0
3,828,721	-		CA265_RS15215	0.73	+0.5
3,828,721	-		CA265_RS15215	0.73	-1.5
3,828,723	-		CA265_RS15215	0.73	+1.1
3,828,762	-		CA265_RS15215	0.76	-0.2
3,828,762	-		CA265_RS15215	0.76	+0.2
3,828,808	+		CA265_RS15215	0.80	-0.0
3,828,813	+		CA265_RS15215	0.80	+0.6
3,828,813	+		CA265_RS15215	0.80	+0.0
3,828,815	+		CA265_RS15215	0.80	-1.2
3,828,831	-		CA265_RS15215	0.81	-0.0
3,828,867	+		CA265_RS15215	0.84	+0.7
3,828,938	+		CA265_RS15215	0.90	+1.9
3,829,016	-				+0.1
3,829,161	-				-1.8
3,829,170	-				+2.1
3,829,191	-				+0.5
3,829,265	+				+0.8
3,829,267	+				-0.1
3,829,360	+		CA265_RS15220	0.19	+0.1
3,829,368	-		CA265_RS15220	0.20	-0.2
3,829,424	+		CA265_RS15220	0.32	+1.1
3,829,424	+		CA265_RS15220	0.32	+0.4
3,829,447	+		CA265_RS15220	0.37	-0.3
3,829,448	-		CA265_RS15220	0.37	+0.6
3,829,469	+		CA265_RS15220	0.42	-0.4
3,829,469	+		CA265_RS15220	0.42	+0.2
3,829,482	-		CA265_RS15220	0.44	+0.3
3,829,492	-		CA265_RS15220	0.46	-0.0
3,829,498	+		CA265_RS15220	0.48	+0.2
3,829,526	+		CA265_RS15220	0.54	+0.0
3,829,542	-		CA265_RS15220	0.57	+1.6
3,829,655	-		CA265_RS15220	0.81	-0.2
3,829,785	+				+0.5
3,829,855	+				+0.0
3,829,860	-				+0.4
3,829,912	+		CA265_RS15225	0.13	-0.6
3,829,922	-		CA265_RS15225	0.15	+1.5
3,830,000	+		CA265_RS15225	0.33	-0.3
3,830,001	-		CA265_RS15225	0.33	+0.9
3,830,001	-		CA265_RS15225	0.33	-0.3
3,830,007	-		CA265_RS15225	0.34	+0.1
3,830,063	+		CA265_RS15225	0.47	+0.8
3,830,065	+		CA265_RS15225	0.48	+0.3