Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15170

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
3,818,490	+		CA265_RS15160	0.36	+1.5
3,818,500	-		CA265_RS15160	0.38	-1.4
3,818,636	+		CA265_RS15160	0.67	-0.5
3,818,731	-		CA265_RS15160	0.87	-1.3
3,818,772	-				-1.5
3,818,789	+				-1.0
3,818,791	+				-1.0
3,818,830	+				-1.0
3,818,986	-		CA265_RS15165	0.19	+0.7
3,819,070	-		CA265_RS15165	0.33	+1.5
3,819,226	-		CA265_RS15165	0.58	+0.0
3,819,247	+		CA265_RS15165	0.62	+0.3
3,819,247	+		CA265_RS15165	0.62	-0.1
3,819,315	-		CA265_RS15165	0.73	+1.8
3,819,336	+		CA265_RS15165	0.76	+0.1
3,819,337	-		CA265_RS15165	0.76	-1.4
3,819,354	+		CA265_RS15165	0.79	-0.7
3,819,354	+		CA265_RS15165	0.79	+0.2
3,819,357	+		CA265_RS15165	0.80	-0.0
3,819,358	-		CA265_RS15165	0.80	+0.6
3,819,473	+				+1.1
3,819,473	+				+0.7
3,819,474	-				+1.0
3,819,585	+				-0.3
3,819,586	-				+1.5
3,819,617	+				+0.5
3,819,769	-		CA265_RS15170	0.16	+1.0
3,819,769	-		CA265_RS15170	0.16	+1.1
3,819,833	+		CA265_RS15170	0.20	+0.8
3,819,881	-		CA265_RS15170	0.23	+1.2
3,819,935	+		CA265_RS15170	0.26	+0.2
3,819,939	+		CA265_RS15170	0.26	+0.8
3,820,093	-		CA265_RS15170	0.35	+1.5
3,820,096	+		CA265_RS15170	0.35	+0.7
3,820,096	+		CA265_RS15170	0.35	+0.7
3,820,097	-		CA265_RS15170	0.35	+1.0
3,820,097	-		CA265_RS15170	0.35	+1.0
3,820,097	-		CA265_RS15170	0.35	+1.0
3,820,097	-		CA265_RS15170	0.35	+1.8
3,820,116	+		CA265_RS15170	0.36	+0.6
3,820,174	-		CA265_RS15170	0.40	+1.0
3,820,174	-		CA265_RS15170	0.40	+3.8
3,820,178	-		CA265_RS15170	0.40	+1.7
3,820,233	-		CA265_RS15170	0.43	+0.4
3,820,271	+		CA265_RS15170	0.45	+1.0
3,820,271	+		CA265_RS15170	0.45	+0.7
3,820,271	+		CA265_RS15170	0.45	+0.2
3,820,272	-		CA265_RS15170	0.45	+0.7
3,820,272	-		CA265_RS15170	0.45	+0.9
3,820,310	-		CA265_RS15170	0.48	+1.2
3,820,377	+		CA265_RS15170	0.51	+2.2
3,820,385	+		CA265_RS15170	0.52	+0.5
3,820,508	-				+2.2
3,820,610	-		CA265_RS15170	0.65	+1.3
3,820,617	+		CA265_RS15170	0.65	+0.4
3,820,618	-		CA265_RS15170	0.65	-0.4
3,820,618	-		CA265_RS15170	0.65	+1.8
3,820,621	-		CA265_RS15170	0.66	+0.2
3,820,725	+		CA265_RS15170	0.72	+0.7
3,820,726	-		CA265_RS15170	0.72	+1.5
3,820,773	-		CA265_RS15170	0.74	+4.5
3,820,824	-		CA265_RS15170	0.77	-1.7
3,820,900	-		CA265_RS15170	0.82	+1.5
3,821,001	+		CA265_RS15170	0.87	+1.9
3,821,059	-				+1.6
3,821,059	-				+1.7
3,821,149	-				+0.1
3,821,194	+				+0.9
3,821,287	+				-0.1
3,821,293	-				+0.2
3,821,294	+				-0.1
3,821,294	+				+0.9
3,821,295	-				-0.1
3,821,295	-				-0.3
3,821,295	-				+0.4
3,821,305	-				+0.3
3,821,306	+				+0.6
3,821,307	-				+1.4
3,821,399	+				+0.6
3,821,400	-				+0.7
3,821,428	-				-0.8
3,821,428	-				+1.6
3,821,472	+		CA265_RS15175	0.18	+1.3
3,821,472	+		CA265_RS15175	0.18	+1.5
3,821,515	-		CA265_RS15175	0.27	+0.9
3,821,597	+		CA265_RS15175	0.45	+0.3
3,821,598	-		CA265_RS15175	0.45	-0.1
3,821,656	-		CA265_RS15175	0.57	+0.8
3,821,722	+		CA265_RS15175	0.72	+0.9
3,821,723	-		CA265_RS15175	0.72	-0.1
3,821,723	-		CA265_RS15175	0.72	+1.0
3,821,723	-		CA265_RS15175	0.72	-0.1
3,821,735	-		CA265_RS15175	0.74	-0.9
3,821,764	-		CA265_RS15175	0.81	+0.5
3,821,890	+				+0.3