Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15115

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
3,805,296	+				+0.0
3,805,296	+				-0.3
3,805,297	-				-1.2
3,805,297	-				-3.3
3,805,326	+				+0.5
3,805,341	+				+0.4
3,805,366	+				-0.1
3,805,397	+				+2.3
3,805,426	+				+0.2
3,805,426	+				-1.0
3,805,476	+				+0.2
3,805,510	+		CA265_RS15110	0.11	+1.1
3,805,684	-		CA265_RS15110	0.34	-1.2
3,805,684	-		CA265_RS15110	0.34	-1.8
3,805,684	-		CA265_RS15110	0.34	-1.4
3,805,713	+		CA265_RS15110	0.38	+0.9
3,805,777	-		CA265_RS15110	0.47	+1.5
3,805,797	+		CA265_RS15110	0.49	-0.2
3,805,830	-		CA265_RS15110	0.54	-1.1
3,805,852	-		CA265_RS15110	0.57	-2.3
3,805,878	+		CA265_RS15110	0.60	+0.4
3,805,878	+		CA265_RS15110	0.60	+1.1
3,805,901	-		CA265_RS15110	0.63	-0.8
3,806,033	+		CA265_RS15110	0.80	+0.2
3,806,033	+		CA265_RS15110	0.80	-0.1
3,806,034	-		CA265_RS15110	0.81	-2.1
3,806,092	+		CA265_RS15110	0.88	+1.0
3,806,102	+		CA265_RS15110	0.89	+1.2
3,806,102	+		CA265_RS15110	0.89	+0.8
3,806,143	-				-0.6
3,806,164	+				-0.1
3,806,164	+				+0.1
3,806,204	+				+0.8
3,806,205	-				-3.5
3,806,206	+				+1.0
3,806,213	+				+0.2
3,806,237	-				-2.3
3,806,237	-				-1.3
3,806,250	+				+0.4
3,806,296	+				+2.3
3,806,317	-				-2.0
3,806,341	-				-1.4
3,806,343	+				+1.6
3,806,405	+		CA265_RS15115	0.17	+1.9
3,806,431	-		CA265_RS15115	0.20	-1.0
3,806,475	+		CA265_RS15115	0.25	+0.4
3,806,522	-		CA265_RS15115	0.31	-1.0
3,806,523	+		CA265_RS15115	0.31	+2.0
3,806,523	+		CA265_RS15115	0.31	+4.5
3,806,588	-		CA265_RS15115	0.40	+0.8
3,806,638	+		CA265_RS15115	0.46	+1.5
3,806,638	+		CA265_RS15115	0.46	+1.6
3,806,675	-		CA265_RS15115	0.51	-0.5
3,806,675	-		CA265_RS15115	0.51	+0.3
3,806,675	-		CA265_RS15115	0.51	-1.6
3,806,705	+		CA265_RS15115	0.54	+2.2
3,806,706	-		CA265_RS15115	0.54	-1.3
3,806,776	-		CA265_RS15115	0.63	+0.1
3,806,776	-		CA265_RS15115	0.63	-0.9
3,806,831	-		CA265_RS15115	0.70	+0.7
3,806,831	-		CA265_RS15115	0.70	-1.3
3,806,831	-		CA265_RS15115	0.70	+0.4
3,806,926	-		CA265_RS15115	0.82	-0.9
3,806,949	+		CA265_RS15115	0.85	+1.5
3,806,951	+		CA265_RS15115	0.85	+1.1
3,807,025	-				-1.2
3,807,865	+				+0.7
3,807,953	+				+0.8