Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS14690

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
3,695,520	+		CA265_RS14685	0.29	-1.4
3,695,521	-		CA265_RS14685	0.29	-0.5
3,695,526	-		CA265_RS14685	0.30	+1.2
3,695,560	+		CA265_RS14685	0.32	-0.7
3,695,561	-		CA265_RS14685	0.33	-0.3
3,695,606	+		CA265_RS14685	0.36	+1.4
3,695,717	-		CA265_RS14685	0.45	+0.4
3,695,719	-		CA265_RS14685	0.45	-0.2
3,695,758	-		CA265_RS14685	0.48	-1.6
3,695,856	-		CA265_RS14685	0.56	-0.5
3,695,867	+		CA265_RS14685	0.57	-0.3
3,695,917	+		CA265_RS14685	0.61	-0.2
3,695,928	+		CA265_RS14685	0.62	-2.0
3,696,127	+		CA265_RS14685	0.77	-1.3
3,696,127	+		CA265_RS14685	0.77	+1.6
3,696,130	-		CA265_RS14685	0.77	-0.4
3,696,171	+		CA265_RS14685	0.81	-0.7
3,696,242	+		CA265_RS14685	0.86	+0.1
3,696,358	+				-0.4
3,696,359	-				-0.4
3,696,374	-				+0.3
3,696,388	+				+0.3
3,696,389	-				+0.6
3,696,389	-				+0.2
3,696,389	-				-1.6
3,696,443	-				-0.2
3,696,499	-				+0.7
3,696,504	-				+0.3
3,696,519	-				+0.1
3,696,527	-				-1.1
3,696,547	-		CA265_RS14690	0.12	-0.2
3,696,549	-		CA265_RS14690	0.12	+0.8
3,696,568	+		CA265_RS14690	0.16	-1.9
3,696,569	-		CA265_RS14690	0.16	-0.3
3,696,575	-		CA265_RS14690	0.18	-0.9
3,696,657	-		CA265_RS14690	0.34	-0.7
3,696,746	+		CA265_RS14690	0.52	-0.3
3,696,746	+		CA265_RS14690	0.52	-1.0
3,696,747	-		CA265_RS14690	0.52	+1.1
3,696,819	-		CA265_RS14690	0.66	-1.1
3,696,850	-		CA265_RS14690	0.72	+0.1
3,696,879	+		CA265_RS14690	0.78	+0.2
3,696,880	-		CA265_RS14690	0.78	-0.1
3,696,880	-		CA265_RS14690	0.78	+0.7
3,696,890	+		CA265_RS14690	0.80	-0.9
3,696,973	-				+0.1
3,696,977	-				+0.2
3,697,099	+				+0.2
3,697,109	-				+1.1
3,697,232	+				+1.1
3,697,251	+				+1.1
3,697,258	-				+0.4
3,697,297	-				-0.2
3,697,297	-				+1.2
3,697,297	-				+0.0
3,697,357	-				+0.2
3,697,366	-				+0.1
3,697,424	-		CA265_RS14695	0.12	-0.5
3,697,436	-		CA265_RS14695	0.13	+1.1
3,697,577	-		CA265_RS14695	0.22	-1.1
3,697,594	+		CA265_RS14695	0.23	+1.4
3,697,595	-		CA265_RS14695	0.23	+0.3
3,697,617	+		CA265_RS14695	0.24	+2.5
3,697,617	+		CA265_RS14695	0.24	+0.7
3,697,618	-		CA265_RS14695	0.24	+0.3
3,697,625	-		CA265_RS14695	0.25	-0.4
3,697,642	-		CA265_RS14695	0.26	+1.8
3,697,730	+		CA265_RS14695	0.31	+0.0
3,697,730	+		CA265_RS14695	0.31	+0.4
3,697,821	+		CA265_RS14695	0.37	-0.9
3,697,822	-		CA265_RS14695	0.37	-0.1
3,697,855	-		CA265_RS14695	0.39	+0.6
3,697,885	-		CA265_RS14695	0.41	+0.1