Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10750

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
2,657,705	+		CA265_RS10745	0.76	+0.2
2,657,731	+		CA265_RS10745	0.77	-0.8
2,657,734	-		CA265_RS10745	0.77	-0.3
2,657,796	-		CA265_RS10745	0.79	+0.1
2,657,813	+		CA265_RS10745	0.79	-0.3
2,657,814	-		CA265_RS10745	0.80	+0.7
2,657,894	-		CA265_RS10745	0.82	-0.8
2,657,899	-		CA265_RS10745	0.82	+0.6
2,657,899	-		CA265_RS10745	0.82	+0.4
2,658,013	+		CA265_RS10745	0.86	-0.5
2,658,017	+		CA265_RS10745	0.86	+0.6
2,658,062	+		CA265_RS10745	0.88	-0.7
2,658,120	+		CA265_RS10745	0.90	-0.1
2,658,166	-				+0.2
2,658,229	-				+0.4
2,658,297	+				-0.4
2,658,300	+				-1.1
2,658,339	-				+0.4
2,658,363	-				-0.9
2,658,369	-				-0.4
2,658,454	+				-0.7
2,658,548	+				-1.0
2,658,563	+				-1.2
2,658,563	+				-0.2
2,658,563	+				+1.2
2,658,564	-				-0.6
2,658,564	-				-0.7
2,658,571	-				-1.1
2,658,586	+				-0.2
2,658,587	-				-0.0
2,658,593	+				+0.4
2,658,594	-				-0.5
2,658,656	-				-1.1
2,658,680	+				-0.2
2,658,721	+				+1.4
2,658,722	-				+0.2
2,658,758	+		CA265_RS10750	0.14	+2.2
2,658,769	+		CA265_RS10750	0.16	+1.2
2,658,769	+		CA265_RS10750	0.16	+1.4
2,658,769	+		CA265_RS10750	0.16	+2.0
2,658,841	-		CA265_RS10750	0.28	+1.1
2,658,842	+		CA265_RS10750	0.28	+0.8
2,658,877	+		CA265_RS10750	0.35	+0.9
2,658,993	-		CA265_RS10750	0.55	+0.6
2,659,046	+		CA265_RS10750	0.64	+2.2
2,659,047	-		CA265_RS10750	0.65	+0.6
2,659,128	-		CA265_RS10750	0.79	+1.7
2,659,137	-		CA265_RS10750	0.80	+0.7
2,659,150	+		CA265_RS10750	0.83	+1.7
2,659,150	+		CA265_RS10750	0.83	+1.7
2,659,151	-		CA265_RS10750	0.83	+0.3
2,659,151	-		CA265_RS10750	0.83	+0.1
2,659,151	-		CA265_RS10750	0.83	-3.4
2,659,154	+		CA265_RS10750	0.83	+1.7
2,659,246	-				+0.4
2,659,250	-				+0.1
2,659,474	+		CA265_RS10755	0.72	+4.5
2,659,525	-				+2.4
2,659,525	-				+1.9
2,659,528	-				-0.1
2,659,610	+				-1.2
2,659,668	+				-0.4
2,659,818	+		CA265_RS10760	0.19	-0.6
2,660,045	-		CA265_RS10760	0.40	-0.4
2,660,227	+		CA265_RS10760	0.56	+2.2