Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10635

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
2,629,247	+				-0.3
2,629,247	+				-1.4
2,629,248	-				+0.3
2,629,248	-				-0.9
2,629,326	+				-0.8
2,629,327	-				-1.2
2,629,327	-				-2.3
2,629,330	+				-0.4
2,629,337	-				-0.2
2,629,398	+				-2.6
2,629,425	-				-0.6
2,629,449	-				-0.2
2,629,474	+				+0.0
2,629,487	+		CA265_RS10635	0.11	+0.1
2,629,488	-		CA265_RS10635	0.11	-0.5
2,629,488	-		CA265_RS10635	0.11	-0.0
2,629,564	-		CA265_RS10635	0.17	-0.5
2,629,635	-		CA265_RS10635	0.23	+0.5
2,629,667	+		CA265_RS10635	0.26	-0.3
2,629,669	+		CA265_RS10635	0.26	-0.1
2,629,670	-		CA265_RS10635	0.26	+1.0
2,629,702	+		CA265_RS10635	0.29	+1.4
2,629,702	+		CA265_RS10635	0.29	-0.4
2,629,740	-		CA265_RS10635	0.32	-0.6
2,629,766	+		CA265_RS10635	0.35	+0.2
2,629,847	-		CA265_RS10635	0.42	+0.0
2,629,847	-		CA265_RS10635	0.42	-1.6
2,629,850	+		CA265_RS10635	0.42	-0.0
2,629,856	+		CA265_RS10635	0.42	-0.1
2,629,856	+		CA265_RS10635	0.42	+0.6
2,629,864	-		CA265_RS10635	0.43	-0.2
2,629,864	-		CA265_RS10635	0.43	-1.4
2,629,870	-		CA265_RS10635	0.43	-2.8
2,629,870	-		CA265_RS10635	0.43	-1.8
2,629,878	-		CA265_RS10635	0.44	-0.4
2,629,884	+		CA265_RS10635	0.45	+1.5
2,629,901	-		CA265_RS10635	0.46	+0.6
2,629,926	+		CA265_RS10635	0.48	-0.2
2,629,966	-		CA265_RS10635	0.52	+0.4
2,630,068	-		CA265_RS10635	0.61	-0.3
2,630,078	-		CA265_RS10635	0.61	-1.7
2,630,132	+		CA265_RS10635	0.66	-0.8
2,630,133	-		CA265_RS10635	0.66	-1.2
2,630,174	+		CA265_RS10635	0.70	+0.6
2,630,246	+		CA265_RS10635	0.76	-1.6
2,630,249	-		CA265_RS10635	0.76	+0.1
2,630,325	+		CA265_RS10635	0.83	+0.1
2,630,349	+		CA265_RS10635	0.85	-0.4
2,630,416	-				-0.8
2,630,417	+				-0.1
2,630,437	-				+0.4
2,630,570	-				-1.1
2,630,617	+				+0.1
2,630,719	-				-0.4
2,630,740	+				+0.3
2,630,806	+				+1.9
2,630,848	+				-1.1
2,630,850	+				-0.1
2,630,856	-				+0.1
2,630,866	+				+0.1
2,630,877	+				+0.5
2,630,878	-				-0.9
2,630,880	-				-1.9
2,630,883	+				+0.8
2,630,940	+				+0.6
2,630,941	-				-0.2
2,631,047	+				-0.1
2,631,079	+				+1.2
2,631,101	-				+0.9
2,631,104	+				+0.6
2,631,146	+		CA265_RS10640	0.12	+0.4
2,631,251	-		CA265_RS10640	0.19	-0.8
2,631,289	+		CA265_RS10640	0.21	-0.6
2,631,289	+		CA265_RS10640	0.21	-0.5
2,631,290	-		CA265_RS10640	0.21	-1.1
2,631,383	+		CA265_RS10640	0.27	+0.2