Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10595

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
2,619,991	+		CA265_RS10585	0.47	-0.3
2,620,056	-		CA265_RS10585	0.65	+0.3
2,620,068	-		CA265_RS10585	0.69	+0.4
2,620,095	+		CA265_RS10585	0.76	+0.1
2,620,103	+		CA265_RS10585	0.78	-1.0
2,620,115	+		CA265_RS10585	0.82	+1.5
2,620,124	+		CA265_RS10585	0.84	+0.1
2,620,124	+		CA265_RS10585	0.84	-0.0
2,620,128	+		CA265_RS10585	0.85	+0.4
2,620,259	+				-0.6
2,620,260	-				-0.6
2,620,294	-				-0.2
2,620,747	+		CA265_RS10590	0.73	+1.2
2,620,811	+				+0.6
2,621,002	+				+2.1
2,621,002	+				+0.9
2,621,227	+		CA265_RS10595	0.19	+1.4
2,621,227	+		CA265_RS10595	0.19	+1.9
2,621,228	-		CA265_RS10595	0.19	+3.1
2,621,228	-		CA265_RS10595	0.19	+2.7
2,621,228	-		CA265_RS10595	0.19	+4.3
2,621,228	-		CA265_RS10595	0.19	+4.3
2,621,288	-		CA265_RS10595	0.23	+3.5
2,621,353	+		CA265_RS10595	0.28	+0.6
2,621,354	-		CA265_RS10595	0.28	+3.2
2,621,398	-		CA265_RS10595	0.31	+4.1
2,621,530	+		CA265_RS10595	0.41	+1.2
2,621,532	+		CA265_RS10595	0.41	+0.1
2,621,533	-		CA265_RS10595	0.41	+3.4
2,621,538	-		CA265_RS10595	0.41	+2.9
2,621,546	-		CA265_RS10595	0.42	+3.4
2,621,549	-		CA265_RS10595	0.42	+3.2
2,621,555	-		CA265_RS10595	0.43	+2.7
2,621,621	+		CA265_RS10595	0.47	+1.9
2,621,622	-		CA265_RS10595	0.47	+3.0
2,621,684	-		CA265_RS10595	0.52	+3.1
2,621,855	-		CA265_RS10595	0.64	+3.4
2,621,979	+		CA265_RS10595	0.73	+1.1
2,622,049	+		CA265_RS10595	0.78	+2.0
2,622,163	-		CA265_RS10595	0.87	+2.0
2,622,239	-				+2.9
2,622,239	-				+1.8
2,622,241	-				+2.3
2,622,385	-				-1.8
2,622,390	-				+0.1
2,622,482	+				-1.1
2,622,493	+				-0.5
2,622,493	+				-0.1
2,622,495	+				-0.9
2,622,495	+				-0.9
2,622,525	+				-0.8
2,622,525	+				-0.6
2,622,570	+		CA265_RS10600	0.13	+0.6
2,622,581	+		CA265_RS10600	0.15	+0.4
2,622,583	+		CA265_RS10600	0.15	-1.7
2,622,715	-		CA265_RS10600	0.42	-1.9
2,622,719	+		CA265_RS10600	0.43	-0.2
2,622,719	+		CA265_RS10600	0.43	-2.1
2,622,756	+		CA265_RS10600	0.50	-1.3
2,622,763	+		CA265_RS10600	0.52	-2.0
2,622,783	+		CA265_RS10600	0.56	-0.3
2,622,826	+		CA265_RS10600	0.64	-0.2
2,622,869	-		CA265_RS10600	0.73	-2.3
2,622,893	+		CA265_RS10600	0.78	-2.0
2,622,959	-				-0.6
2,622,959	-				-0.9
2,622,978	+				+4.9
2,622,979	-				-2.0