Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09870

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
2,433,215	+				-0.8
2,433,348	+		CA265_RS09865	0.14	+0.3
2,433,407	-		CA265_RS09865	0.20	-0.4
2,433,540	+		CA265_RS09865	0.33	-0.2
2,433,614	-		CA265_RS09865	0.41	-1.3
2,433,646	-		CA265_RS09865	0.44	-0.3
2,433,709	-		CA265_RS09865	0.50	+0.5
2,433,709	-		CA265_RS09865	0.50	+0.0
2,433,852	+		CA265_RS09865	0.65	+0.2
2,433,853	-		CA265_RS09865	0.65	+0.4
2,433,883	+		CA265_RS09865	0.68	+1.6
2,433,884	-		CA265_RS09865	0.68	+0.6
2,433,929	-		CA265_RS09865	0.73	+0.4
2,433,931	+		CA265_RS09865	0.73	+1.2
2,433,975	+		CA265_RS09865	0.77	-0.2
2,434,139	-				-0.9
2,434,181	+				-0.6
2,434,239	+				+0.3
2,434,280	+		CA265_RS09870	0.14	+0.3
2,434,281	-		CA265_RS09870	0.14	-0.8
2,434,281	-		CA265_RS09870	0.14	+0.3
2,434,290	+		CA265_RS09870	0.15	+0.2
2,434,358	+		CA265_RS09870	0.26	+0.0
2,434,358	+		CA265_RS09870	0.26	+0.1
2,434,358	+		CA265_RS09870	0.26	+0.1
2,434,358	+		CA265_RS09870	0.26	-0.1
2,434,359	-		CA265_RS09870	0.26	+0.3
2,434,413	+		CA265_RS09870	0.35	-0.0
2,434,414	-		CA265_RS09870	0.35	-1.2
2,434,446	-		CA265_RS09870	0.40	+0.4
2,434,641	+		CA265_RS09870	0.72	+1.0
2,434,712	+		CA265_RS09870	0.83	+0.9
2,434,750	-		CA265_RS09870	0.89	+0.1
2,434,750	-		CA265_RS09870	0.89	+0.2
2,434,781	+				+1.0
2,434,843	+				+1.8
2,434,915	-				-0.4
2,434,923	-				-0.1
2,434,924	+				+2.2
2,435,073	+		CA265_RS09875	0.12	-1.2
2,435,074	-		CA265_RS09875	0.12	-0.6
2,435,108	+		CA265_RS09875	0.18	-0.6
2,435,220	+		CA265_RS09875	0.35	-0.4
2,435,221	-		CA265_RS09875	0.35	-1.2
2,435,245	-		CA265_RS09875	0.39	-0.3
2,435,280	-		CA265_RS09875	0.44	-1.4
2,435,366	+		CA265_RS09875	0.57	-0.6
2,435,368	+		CA265_RS09875	0.58	-0.8
2,435,384	+		CA265_RS09875	0.60	-0.0
2,435,384	+		CA265_RS09875	0.60	+0.7
2,435,641	+				+0.3
2,435,641	+				-0.0
2,435,658	+				-0.5
2,435,673	+				-0.4
2,435,674	-				+0.4
2,435,674	-				+0.4
2,435,696	+				+0.2
2,435,697	-				-1.1
2,435,697	-				-0.5
2,435,725	-				-1.1
2,435,728	+				-0.2
2,435,729	-				+0.0
2,435,729	-				-1.6
2,435,751	-				+1.5
2,435,765	-				-0.9