Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09295

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
2,311,592	+		CA265_RS09285	0.36	-0.4
2,311,593	-		CA265_RS09285	0.36	+0.1
2,311,596	+		CA265_RS09285	0.37	-0.5
2,311,597	-		CA265_RS09285	0.37	-0.4
2,311,597	-		CA265_RS09285	0.37	-1.9
2,311,597	-		CA265_RS09285	0.37	+0.0
2,311,724	-		CA265_RS09285	0.58	-0.2
2,311,724	-		CA265_RS09285	0.58	-0.3
2,311,786	-		CA265_RS09285	0.68	-1.6
2,311,887	+		CA265_RS09285	0.85	-0.2
2,311,952	+				-0.2
2,311,952	+				+0.2
2,311,952	+				-0.5
2,311,970	-				+0.8
2,311,981	-				+1.1
2,311,985	+				-0.9
2,311,985	+				+0.1
2,312,082	+		CA265_RS09290	0.10	+0.4
2,312,082	+		CA265_RS09290	0.10	-0.6
2,312,082	+		CA265_RS09290	0.10	-0.3
2,312,086	+		CA265_RS09290	0.11	+0.1
2,312,086	+		CA265_RS09290	0.11	-0.4
2,312,086	+		CA265_RS09290	0.11	-0.8
2,312,087	-		CA265_RS09290	0.11	+0.6
2,312,087	-		CA265_RS09290	0.11	+0.1
2,312,092	+		CA265_RS09290	0.12	-0.7
2,312,092	+		CA265_RS09290	0.12	-0.1
2,312,092	+		CA265_RS09290	0.12	-0.1
2,312,098	+		CA265_RS09290	0.13	-0.2
2,312,192	+		CA265_RS09290	0.33	+0.7
2,312,244	-		CA265_RS09290	0.43	+0.6
2,312,245	+		CA265_RS09290	0.43	-0.2
2,312,457	+		CA265_RS09290	0.87	-0.8
2,312,483	-				-0.3
2,312,559	+				-1.7
2,312,560	-				+0.4
2,312,560	-				+0.9
2,312,607	-				+0.9
2,312,870	+		CA265_RS09295	0.22	-0.0
2,313,054	-		CA265_RS09295	0.36	+0.6
2,313,086	+		CA265_RS09295	0.39	-0.9
2,313,100	-		CA265_RS09295	0.40	-0.1
2,313,105	-		CA265_RS09295	0.40	+1.2
2,313,147	-		CA265_RS09295	0.43	+1.2
2,313,195	+		CA265_RS09295	0.47	-0.4
2,313,290	+		CA265_RS09295	0.54	-1.4
2,313,390	-		CA265_RS09295	0.62	+0.2
2,313,485	+		CA265_RS09295	0.70	-0.3
2,313,693	-		CA265_RS09295	0.86	+0.3
2,313,753	-				+0.1
2,313,826	+				-1.5
2,313,848	+				-1.3
2,313,849	-				+0.4
2,313,858	+				-1.7
2,313,923	+				+0.5
2,313,924	-				+0.4
2,313,924	-				+0.6
2,313,943	+				-1.9
2,313,997	-				-0.3
2,314,008	+		CA265_RS09300	0.11	+0.3
2,314,008	+		CA265_RS09300	0.11	-1.5
2,314,009	-		CA265_RS09300	0.11	+1.2
2,314,073	+		CA265_RS09300	0.18	-1.0
2,314,074	-		CA265_RS09300	0.19	+0.1
2,314,100	-		CA265_RS09300	0.22	-0.1
2,314,117	-		CA265_RS09300	0.24	+0.5
2,314,117	-		CA265_RS09300	0.24	+0.2
2,314,128	+		CA265_RS09300	0.25	-1.6
2,314,154	+		CA265_RS09300	0.28	-0.1
2,314,182	+		CA265_RS09300	0.31	-0.9
2,314,237	+		CA265_RS09300	0.38	-0.4
2,314,271	+		CA265_RS09300	0.41	+1.6
2,314,398	+		CA265_RS09300	0.56	-0.2
2,314,402	+		CA265_RS09300	0.57	-0.2
2,314,410	+		CA265_RS09300	0.58	+0.1
2,314,412	+		CA265_RS09300	0.58	+0.5
2,314,458	+		CA265_RS09300	0.63	-0.1
2,314,459	-		CA265_RS09300	0.63	+0.1
2,314,562	-		CA265_RS09300	0.75	-0.5
2,314,572	-		CA265_RS09300	0.76	-0.1
2,314,572	-		CA265_RS09300	0.76	+0.4
2,314,640	-		CA265_RS09300	0.84	+0.5
2,314,641	+		CA265_RS09300	0.84	-0.1
2,314,642	-		CA265_RS09300	0.85	+1.1
2,314,647	-		CA265_RS09300	0.85	-0.3
2,314,650	+		CA265_RS09300	0.85	+0.7
2,314,651	-		CA265_RS09300	0.86	-0.1
2,314,672	-		CA265_RS09300	0.88	+1.2
2,314,672	-		CA265_RS09300	0.88	+0.3
2,314,801	+				+0.3