Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35860

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
5,920	+		BPHYT_RS35855	0.65	-2.3
5,952	-		BPHYT_RS35855	0.67	+0.1
5,952	-		BPHYT_RS35855	0.67	+0.6
6,298	-		BPHYT_RS35855	0.84	+0.2
6,386	+		BPHYT_RS35855	0.88	-1.0
6,489	+				-2.5
6,580	+				-1.1
6,581	-				+0.2
6,649	+				-3.4
6,649	+				-3.0
6,650	-				-0.2
6,650	-				-0.1
6,675	+				-1.8
6,675	+				-1.2
6,676	-				-1.2
6,741	-				-0.0
6,741	-				-0.1
6,931	+		BPHYT_RS35860	0.25	-2.0
6,932	-		BPHYT_RS35860	0.25	-0.3
7,149	+		BPHYT_RS35860	0.45	-1.6
7,149	+		BPHYT_RS35860	0.45	-1.1
7,149	+		BPHYT_RS35860	0.45	-2.6
7,150	-		BPHYT_RS35860	0.45	+0.1
7,150	-		BPHYT_RS35860	0.45	-0.1
7,185	-		BPHYT_RS35860	0.48	-0.4
7,185	-		BPHYT_RS35860	0.48	-0.2
7,185	-		BPHYT_RS35860	0.48	-0.4
7,265	+		BPHYT_RS35860	0.55	-3.4
7,712	+				-0.3
7,757	+				-0.1
7,757	+				-2.7
7,777	-				-0.4
7,944	+				-0.2
7,944	+				+0.1
7,945	-				-0.1
7,983	-				+0.1
8,036	+				-0.2
8,088	-				+0.5
8,129	+				+0.6
8,129	+				-1.4
8,130	-				+0.3
8,143	-				-0.4
8,247	+		BPHYT_RS35865	0.40	-0.6
8,247	+		BPHYT_RS35865	0.40	-0.8
8,247	+		BPHYT_RS35865	0.40	-0.9
8,248	-		BPHYT_RS35865	0.40	+1.2
8,396	+		BPHYT_RS35865	0.90	-0.4
8,397	-				+0.0
8,498	-				+0.7
8,535	-				+0.1
8,543	+				+0.0
8,616	+				-0.4
8,616	+				+0.1
8,616	+				-1.4
8,618	+				+2.4
8,618	+				-0.2
8,619	-				+0.6
8,619	-				+0.2
8,619	-				-0.1
8,619	-				-0.1
8,619	-				+1.1
8,619	-				-0.1
8,619	-				-0.3
8,622	+				-0.1
8,623	-				-0.0