Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31200
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,556,271 | + | -3.8 | |||
2,556,317 | + | -2.2 | |||
2,556,600 | + | BPHYT_RS31195 | 0.32 | -2.5 | |
2,556,838 | - | BPHYT_RS31195 | 0.58 | -0.2 | |
2,556,888 | + | BPHYT_RS31195 | 0.63 | -4.2 | |
2,556,889 | - | BPHYT_RS31195 | 0.64 | +0.2 | |
2,557,378 | + | BPHYT_RS31200 | 0.15 | -0.0 | |
2,557,847 | - | BPHYT_RS31200 | 0.63 | +0.0 | |
2,557,916 | + | BPHYT_RS31200 | 0.70 | -1.8 | |
2,557,980 | - | BPHYT_RS31200 | 0.77 | +0.4 | |
2,558,108 | + | BPHYT_RS31200 | 0.90 | -2.1 | |
2,558,619 | + | BPHYT_RS31205 | 0.40 | -0.7 | |
2,558,899 | + | BPHYT_RS31205 | 0.67 | -1.1 | |
2,558,962 | + | BPHYT_RS31205 | 0.73 | -1.8 |
Or see this region's nucleotide sequence