Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31185
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,554,142 | - | -0.2 | |||
2,554,157 | - | +1.3 | |||
2,554,194 | - | +1.3 | |||
2,554,198 | + | +2.0 | |||
2,554,198 | + | +0.0 | |||
2,554,199 | - | -0.4 | |||
2,554,390 | + | BPHYT_RS31185 | 0.11 | -0.8 | |
2,554,390 | + | BPHYT_RS31185 | 0.11 | +0.1 | |
2,554,687 | + | BPHYT_RS31185 | 0.44 | -0.1 | |
2,554,809 | - | BPHYT_RS31185 | 0.57 | -1.0 | |
2,554,809 | - | BPHYT_RS31185 | 0.57 | +0.0 | |
2,554,809 | - | BPHYT_RS31185 | 0.57 | -0.8 | |
2,555,220 | - | -0.2 | |||
2,555,220 | - | -0.4 | |||
2,555,220 | - | +0.0 | |||
2,555,220 | - | +1.2 | |||
2,555,408 | + | -0.7 | |||
2,555,530 | + | BPHYT_RS31190 | 0.19 | -1.8 | |
2,555,531 | - | BPHYT_RS31190 | 0.20 | -0.4 | |
2,555,531 | - | BPHYT_RS31190 | 0.20 | +0.5 | |
2,555,670 | - | BPHYT_RS31190 | 0.34 | -0.1 | |
2,555,670 | - | BPHYT_RS31190 | 0.34 | -0.6 | |
2,555,996 | - | BPHYT_RS31190 | 0.67 | -1.0 |
Or see this region's nucleotide sequence