Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30860
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,477,834 | + | BPHYT_RS30855 | 0.24 | -0.7 | |
2,477,834 | + | BPHYT_RS30855 | 0.24 | -1.7 | |
2,478,062 | + | BPHYT_RS30855 | 0.45 | -0.3 | |
2,478,063 | - | BPHYT_RS30855 | 0.45 | -0.3 | |
2,478,949 | + | BPHYT_RS30860 | 0.28 | -1.2 | |
2,479,263 | + | BPHYT_RS30860 | 0.60 | -0.4 | |
2,479,960 | - | +1.6 | |||
2,480,164 | + | BPHYT_RS30865 | 0.65 | -0.9 | |
2,480,164 | + | BPHYT_RS30865 | 0.65 | +0.4 | |
2,480,165 | - | BPHYT_RS30865 | 0.65 | -0.2 | |
2,480,284 | - | BPHYT_RS30865 | 0.81 | -1.0 |
Or see this region's nucleotide sequence