Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS27000 and BPHYT_RS27005 are separated by 137 nucleotides BPHYT_RS27005 and BPHYT_RS27010 are separated by 512 nucleotides
BPHYT_RS27000: BPHYT_RS27000 - aspartate aminotransferase, at 1,635,411 to 1,636,589
_RS27000
BPHYT_RS27005: BPHYT_RS27005 - RNA polymerase sigma54 factor, at 1,636,727 to 1,638,208
_RS27005
BPHYT_RS27010: BPHYT_RS27010 - transporter, at 1,638,721 to 1,639,062
_RS27010
Position (kb)
1636
1637
1638
1639 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1635.970 kb on + strand, within BPHYT_RS27000 at 1635.971 kb on - strand, within BPHYT_RS27000 at 1635.993 kb on + strand, within BPHYT_RS27000 at 1636.023 kb on - strand, within BPHYT_RS27000 at 1636.213 kb on + strand, within BPHYT_RS27000 at 1636.213 kb on + strand, within BPHYT_RS27000 at 1636.214 kb on - strand, within BPHYT_RS27000 at 1636.214 kb on - strand, within BPHYT_RS27000 at 1636.396 kb on + strand, within BPHYT_RS27000 at 1636.479 kb on + strand at 1636.480 kb on - strand at 1636.777 kb on - strand at 1636.992 kb on + strand, within BPHYT_RS27005 at 1636.993 kb on - strand, within BPHYT_RS27005 at 1637.248 kb on - strand, within BPHYT_RS27005 at 1637.343 kb on + strand, within BPHYT_RS27005 at 1637.343 kb on + strand, within BPHYT_RS27005 at 1637.344 kb on - strand, within BPHYT_RS27005 at 1637.344 kb on - strand, within BPHYT_RS27005 at 1638.191 kb on + strand at 1638.199 kb on + strand at 1638.199 kb on + strand at 1638.200 kb on - strand at 1638.212 kb on - strand at 1638.242 kb on + strand at 1638.246 kb on + strand at 1638.247 kb on - strand at 1638.357 kb on + strand at 1638.358 kb on - strand at 1639.060 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 1,635,970 + BPHYT_RS27000 0.47 -0.3 1,635,971 - BPHYT_RS27000 0.47 -0.3 1,635,993 + BPHYT_RS27000 0.49 -0.1 1,636,023 - BPHYT_RS27000 0.52 -0.4 1,636,213 + BPHYT_RS27000 0.68 -0.7 1,636,213 + BPHYT_RS27000 0.68 -0.2 1,636,214 - BPHYT_RS27000 0.68 +0.9 1,636,214 - BPHYT_RS27000 0.68 -0.3 1,636,396 + BPHYT_RS27000 0.84 +0.9 1,636,479 + +0.2 1,636,480 - +0.5 1,636,777 - +1.0 1,636,992 + BPHYT_RS27005 0.18 -2.8 1,636,993 - BPHYT_RS27005 0.18 -0.5 1,637,248 - BPHYT_RS27005 0.35 +0.1 1,637,343 + BPHYT_RS27005 0.42 -0.4 1,637,343 + BPHYT_RS27005 0.42 -0.3 1,637,344 - BPHYT_RS27005 0.42 +0.3 1,637,344 - BPHYT_RS27005 0.42 +0.1 1,638,191 + +1.2 1,638,199 + -1.2 1,638,199 + -0.5 1,638,200 - +0.3 1,638,212 - -1.4 1,638,242 + +0.9 1,638,246 + -0.1 1,638,247 - +0.5 1,638,357 + -0.4 1,638,358 - +0.1 1,639,060 + -0.3
Or see this region's nucleotide sequence