Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26855
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,597,325 | - | -0.3 | |||
1,597,325 | - | -0.6 | |||
1,597,393 | + | -0.1 | |||
1,597,437 | - | -0.1 | |||
1,597,598 | + | -0.3 | |||
1,597,599 | - | -0.4 | |||
1,597,675 | + | -1.5 | |||
1,597,836 | + | BPHYT_RS26855 | 0.15 | -1.4 | |
1,597,862 | + | BPHYT_RS26855 | 0.18 | -1.5 | |
1,597,871 | - | BPHYT_RS26855 | 0.19 | -0.7 | |
1,597,920 | - | BPHYT_RS26855 | 0.24 | -0.7 | |
1,598,337 | - | BPHYT_RS26855 | 0.71 | -1.3 | |
1,598,540 | + | -0.5 | |||
1,598,550 | + | -0.5 | |||
1,598,551 | - | +0.6 | |||
1,598,551 | - | +0.1 | |||
1,598,551 | - | -0.1 | |||
1,598,829 | + | +1.3 | |||
1,598,830 | - | +0.6 | |||
1,598,830 | - | -0.3 | |||
1,598,830 | - | -0.8 | |||
1,599,008 | + | +1.3 | |||
1,599,161 | + | +0.0 | |||
1,599,162 | - | -0.1 | |||
1,599,162 | - | -0.6 | |||
1,599,162 | - | +0.5 | |||
1,599,164 | - | +0.3 | |||
1,599,285 | - | BPHYT_RS26860 | 0.12 | -0.9 | |
1,599,285 | - | BPHYT_RS26860 | 0.12 | -0.7 |
Or see this region's nucleotide sequence