Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS22550 and BPHYT_RS22555 are separated by 138 nucleotides BPHYT_RS22555 and BPHYT_RS22560 are separated by 14 nucleotides BPHYT_RS22560 and BPHYT_RS22565 are separated by 533 nucleotides
BPHYT_RS22550: BPHYT_RS22550 - manganese transporter, at 620,596 to 621,924
_RS22550
BPHYT_RS22555: BPHYT_RS22555 - transcriptional regulator, at 622,063 to 622,632
_RS22555
BPHYT_RS22560: BPHYT_RS22560 - flagellar transcriptional regulator FlhD, at 622,647 to 622,967
_RS22560
BPHYT_RS22565: BPHYT_RS22565 - membrane protein, at 623,501 to 624,724
_RS22565
Position (kb) 622
623 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 621.145 kb on + strand, within BPHYT_RS22550 at 621.145 kb on + strand, within BPHYT_RS22550 at 621.146 kb on - strand, within BPHYT_RS22550 at 621.242 kb on - strand, within BPHYT_RS22550 at 621.290 kb on - strand at 621.401 kb on + strand, within BPHYT_RS22550 at 621.487 kb on + strand, within BPHYT_RS22550 at 621.487 kb on + strand, within BPHYT_RS22550 at 621.487 kb on + strand, within BPHYT_RS22550 at 621.488 kb on - strand, within BPHYT_RS22550 at 621.489 kb on + strand, within BPHYT_RS22550 at 621.489 kb on + strand, within BPHYT_RS22550 at 621.490 kb on - strand, within BPHYT_RS22550 at 621.948 kb on - strand at 622.325 kb on - strand, within BPHYT_RS22555 at 622.325 kb on - strand, within BPHYT_RS22555 at 622.328 kb on + strand, within BPHYT_RS22555 at 622.329 kb on - strand, within BPHYT_RS22555 at 622.403 kb on + strand, within BPHYT_RS22555 at 622.442 kb on + strand, within BPHYT_RS22555 at 622.442 kb on + strand, within BPHYT_RS22555 at 622.594 kb on + strand at 622.649 kb on - strand at 622.896 kb on - strand, within BPHYT_RS22560 at 622.896 kb on - strand, within BPHYT_RS22560 at 622.896 kb on - strand, within BPHYT_RS22560 at 622.896 kb on - strand, within BPHYT_RS22560 at 622.896 kb on - strand, within BPHYT_RS22560 at 622.994 kb on - strand at 622.996 kb on + strand at 623.017 kb on + strand at 623.073 kb on + strand at 623.133 kb on - strand at 623.173 kb on + strand at 623.223 kb on + strand at 623.386 kb on + strand at 623.393 kb on + strand at 623.567 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 621,145 + BPHYT_RS22550 0.41 -1.4 621,145 + BPHYT_RS22550 0.41 +0.1 621,146 - BPHYT_RS22550 0.41 +0.1 621,242 - BPHYT_RS22550 0.49 -0.5 621,290 - +2.5 621,401 + BPHYT_RS22550 0.61 -0.3 621,487 + BPHYT_RS22550 0.67 -0.1 621,487 + BPHYT_RS22550 0.67 +0.5 621,487 + BPHYT_RS22550 0.67 -0.5 621,488 - BPHYT_RS22550 0.67 -1.0 621,489 + BPHYT_RS22550 0.67 -0.5 621,489 + BPHYT_RS22550 0.67 +0.1 621,490 - BPHYT_RS22550 0.67 -0.1 621,948 - -0.2 622,325 - BPHYT_RS22555 0.46 -1.4 622,325 - BPHYT_RS22555 0.46 -1.3 622,328 + BPHYT_RS22555 0.46 -3.2 622,329 - BPHYT_RS22555 0.47 -1.2 622,403 + BPHYT_RS22555 0.60 -2.1 622,442 + BPHYT_RS22555 0.66 -1.5 622,442 + BPHYT_RS22555 0.66 -0.8 622,594 + -2.2 622,649 - -0.0 622,896 - BPHYT_RS22560 0.78 +0.0 622,896 - BPHYT_RS22560 0.78 +1.4 622,896 - BPHYT_RS22560 0.78 -1.1 622,896 - BPHYT_RS22560 0.78 +0.2 622,896 - BPHYT_RS22560 0.78 +0.1 622,994 - +0.2 622,996 + +0.1 623,017 + +0.3 623,073 + +0.0 623,133 - -1.7 623,173 + -0.5 623,223 + +0.2 623,386 + -0.5 623,393 + -1.0 623,567 + -1.0
Or see this region's nucleotide sequence