Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS19105 and BPHYT_RS19110 are separated by 2 nucleotides BPHYT_RS19110 and BPHYT_RS19115 are separated by 11 nucleotides BPHYT_RS19115 and BPHYT_RS19120 are separated by 10 nucleotides
BPHYT_RS19105: BPHYT_RS19105 - aminotransferase, at 4,288,014 to 4,289,171
_RS19105
BPHYT_RS19110: BPHYT_RS19110 - 3-oxoacyl-ACP synthase, at 4,289,174 to 4,290,214
_RS19110
BPHYT_RS19115: BPHYT_RS19115 - acyl carrier protein, at 4,290,226 to 4,290,453
_RS19115
BPHYT_RS19120: BPHYT_RS19120 - 3-oxoacyl-ACP synthase, at 4,290,464 to 4,291,528
_RS19120
Position (kb) 4289
4290
4291 Strain fitness (log2 ratio) -2
-1
0
1 at 4288.206 kb on + strand, within BPHYT_RS19105 at 4288.309 kb on - strand, within BPHYT_RS19105 at 4288.507 kb on - strand, within BPHYT_RS19105 at 4288.507 kb on - strand, within BPHYT_RS19105 at 4288.960 kb on - strand, within BPHYT_RS19105 at 4288.986 kb on + strand, within BPHYT_RS19105 at 4288.987 kb on - strand, within BPHYT_RS19105 at 4288.987 kb on - strand, within BPHYT_RS19105 at 4288.999 kb on - strand, within BPHYT_RS19105 at 4289.004 kb on + strand, within BPHYT_RS19105 at 4289.004 kb on + strand, within BPHYT_RS19105 at 4289.031 kb on + strand, within BPHYT_RS19105 at 4289.456 kb on + strand, within BPHYT_RS19110 at 4289.456 kb on + strand, within BPHYT_RS19110 at 4289.457 kb on - strand, within BPHYT_RS19110 at 4289.550 kb on - strand, within BPHYT_RS19110 at 4289.550 kb on - strand, within BPHYT_RS19110 at 4289.550 kb on - strand, within BPHYT_RS19110 at 4289.631 kb on - strand, within BPHYT_RS19110 at 4289.639 kb on + strand, within BPHYT_RS19110 at 4289.876 kb on + strand, within BPHYT_RS19110 at 4289.876 kb on + strand, within BPHYT_RS19110 at 4289.876 kb on + strand, within BPHYT_RS19110 at 4289.876 kb on + strand, within BPHYT_RS19110 at 4289.876 kb on + strand, within BPHYT_RS19110 at 4289.877 kb on - strand, within BPHYT_RS19110 at 4290.212 kb on + strand at 4290.283 kb on - strand, within BPHYT_RS19115 at 4290.283 kb on - strand, within BPHYT_RS19115 at 4290.499 kb on - strand at 4291.106 kb on + strand, within BPHYT_RS19120
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 4,288,206 + BPHYT_RS19105 0.17 -0.5 4,288,309 - BPHYT_RS19105 0.25 +0.5 4,288,507 - BPHYT_RS19105 0.43 +0.1 4,288,507 - BPHYT_RS19105 0.43 +0.5 4,288,960 - BPHYT_RS19105 0.82 -0.1 4,288,986 + BPHYT_RS19105 0.84 +0.2 4,288,987 - BPHYT_RS19105 0.84 +1.4 4,288,987 - BPHYT_RS19105 0.84 +0.1 4,288,999 - BPHYT_RS19105 0.85 +0.3 4,289,004 + BPHYT_RS19105 0.85 -0.3 4,289,004 + BPHYT_RS19105 0.85 +0.1 4,289,031 + BPHYT_RS19105 0.88 -0.1 4,289,456 + BPHYT_RS19110 0.27 +0.4 4,289,456 + BPHYT_RS19110 0.27 -0.4 4,289,457 - BPHYT_RS19110 0.27 +0.6 4,289,550 - BPHYT_RS19110 0.36 +0.7 4,289,550 - BPHYT_RS19110 0.36 +0.6 4,289,550 - BPHYT_RS19110 0.36 +0.9 4,289,631 - BPHYT_RS19110 0.44 -2.5 4,289,639 + BPHYT_RS19110 0.45 -0.5 4,289,876 + BPHYT_RS19110 0.67 +0.8 4,289,876 + BPHYT_RS19110 0.67 -0.2 4,289,876 + BPHYT_RS19110 0.67 +0.6 4,289,876 + BPHYT_RS19110 0.67 +0.2 4,289,876 + BPHYT_RS19110 0.67 +0.4 4,289,877 - BPHYT_RS19110 0.68 +0.7 4,290,212 + -0.4 4,290,283 - BPHYT_RS19115 0.25 +0.1 4,290,283 - BPHYT_RS19115 0.25 -0.1 4,290,499 - +0.7 4,291,106 + BPHYT_RS19120 0.60 +0.6
Or see this region's nucleotide sequence