Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS18845

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
4,233,792	+		BPHYT_RS18840	0.32	+0.4
4,233,928	-		BPHYT_RS18840	0.43	+1.1
4,233,929	+		BPHYT_RS18840	0.43	-0.0
4,233,929	+		BPHYT_RS18840	0.43	+0.5
4,233,929	+		BPHYT_RS18840	0.43	-0.0
4,233,930	-		BPHYT_RS18840	0.43	+1.0
4,233,930	-		BPHYT_RS18840	0.43	+0.9
4,233,930	-		BPHYT_RS18840	0.43	+1.2
4,233,960	-		BPHYT_RS18840	0.45	+1.2
4,233,960	-		BPHYT_RS18840	0.45	+0.6
4,233,960	-		BPHYT_RS18840	0.45	+0.4
4,234,194	-		BPHYT_RS18840	0.64	+0.9
4,234,229	+		BPHYT_RS18840	0.67	+0.9
4,234,356	+		BPHYT_RS18840	0.78	+1.0
4,234,356	+		BPHYT_RS18840	0.78	+1.2
4,234,356	+		BPHYT_RS18840	0.78	+0.7
4,234,377	+		BPHYT_RS18840	0.79	+1.2
4,234,377	+		BPHYT_RS18840	0.79	+0.7
4,234,446	-		BPHYT_RS18840	0.85	+0.7
4,234,551	-				+0.8
4,234,599	+				+0.6
4,234,599	+				+0.9
4,234,600	-				-0.3
4,234,600	-				+1.5
4,234,608	-				+1.0
4,234,722	+				+0.5
4,234,723	-				-0.0
4,234,852	+		BPHYT_RS18845	0.11	+0.7
4,234,863	+		BPHYT_RS18845	0.11	+0.0
4,234,863	+		BPHYT_RS18845	0.11	+0.4
4,235,091	+		BPHYT_RS18845	0.23	-0.3
4,235,091	+		BPHYT_RS18845	0.23	+0.8
4,235,092	-		BPHYT_RS18845	0.23	+0.6
4,235,124	+		BPHYT_RS18845	0.25	+0.5
4,235,124	+		BPHYT_RS18845	0.25	+0.8
4,235,125	-		BPHYT_RS18845	0.25	-0.5
4,235,197	-		BPHYT_RS18845	0.28	+2.0
4,235,496	+		BPHYT_RS18845	0.43	+0.7
4,235,497	-		BPHYT_RS18845	0.43	+0.5
4,235,497	-		BPHYT_RS18845	0.43	+0.5
4,235,511	+		BPHYT_RS18845	0.44	+0.9
4,235,512	-		BPHYT_RS18845	0.44	+0.8
4,235,512	-		BPHYT_RS18845	0.44	+1.1
4,235,601	+		BPHYT_RS18845	0.49	+1.2
4,235,844	+		BPHYT_RS18845	0.61	+0.6
4,235,896	+		BPHYT_RS18845	0.64	+0.7
4,235,898	+		BPHYT_RS18845	0.64	+0.4
4,235,898	+		BPHYT_RS18845	0.64	+0.1
4,235,899	-		BPHYT_RS18845	0.64	+0.2
4,235,899	-		BPHYT_RS18845	0.64	+0.6
4,235,899	-		BPHYT_RS18845	0.64	+1.0
4,235,950	-		BPHYT_RS18845	0.66	+0.4
4,236,065	-		BPHYT_RS18845	0.72	+0.7
4,236,065	-		BPHYT_RS18845	0.72	+0.8
4,236,065	-		BPHYT_RS18845	0.72	+1.0
4,236,099	+		BPHYT_RS18845	0.74	+0.4
4,236,276	+		BPHYT_RS18845	0.83	+0.6
4,236,276	+		BPHYT_RS18845	0.83	+0.9
4,236,277	-		BPHYT_RS18845	0.83	+1.2
4,236,351	+		BPHYT_RS18845	0.87	+0.6
4,236,352	-		BPHYT_RS18845	0.87	+0.7
4,236,405	+		BPHYT_RS18845	0.89	+0.5
4,236,405	+		BPHYT_RS18845	0.89	+0.5
4,236,406	-		BPHYT_RS18845	0.89	+1.0
4,236,415	-		BPHYT_RS18845	0.90	+1.1
4,236,456	+				+0.7
4,236,456	+				-0.5
4,236,471	+				+0.9
4,236,472	-				+0.8
4,236,492	+				-1.0
4,236,493	-				-0.6
4,236,638	+				+0.5
4,236,639	-				+2.8
4,237,209	+		BPHYT_RS18850	0.42	-0.5
4,237,209	+		BPHYT_RS18850	0.42	+0.3
4,237,210	-		BPHYT_RS18850	0.42	-1.2
4,237,210	-		BPHYT_RS18850	0.42	-0.1
4,237,210	-		BPHYT_RS18850	0.42	-0.3
4,237,210	-		BPHYT_RS18850	0.42	-2.6
4,237,247	-		BPHYT_RS18850	0.47	-0.5
4,237,264	+		BPHYT_RS18850	0.49	-0.9
4,237,265	-		BPHYT_RS18850	0.49	-1.1