Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS18775

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
4,220,275	-				-1.4
4,220,275	-				-2.2
4,220,388	-				+2.2
4,220,388	-				+0.8
4,220,388	-				+2.5
4,220,388	-				+1.4
4,220,420	+				-1.4
4,220,421	-				+2.0
4,220,440	+				-1.2
4,220,441	-				+1.5
4,220,553	+				-3.1
4,220,554	-				-0.3
4,220,779	+		BPHYT_RS18770	0.76	+0.4
4,220,932	-				+0.1
4,220,950	+				-3.1
4,220,970	-				-1.3
4,220,970	-				-2.0
4,220,970	-				-2.3
4,221,363	+		BPHYT_RS18775	0.15	-2.4
4,221,364	-		BPHYT_RS18775	0.15	-1.6
4,221,364	-		BPHYT_RS18775	0.15	-2.5
4,221,442	-		BPHYT_RS18775	0.19	-1.9
4,221,442	-		BPHYT_RS18775	0.19	-2.1
4,221,442	-		BPHYT_RS18775	0.19	-2.2
4,221,442	-		BPHYT_RS18775	0.19	-2.1
4,221,606	+		BPHYT_RS18775	0.28	-2.4
4,221,606	+		BPHYT_RS18775	0.28	-1.8
4,221,606	+		BPHYT_RS18775	0.28	-2.5
4,221,607	-		BPHYT_RS18775	0.28	-2.5
4,221,800	+		BPHYT_RS18775	0.39	-0.8
4,221,800	+		BPHYT_RS18775	0.39	-1.7
4,221,800	+		BPHYT_RS18775	0.39	-3.5
4,221,800	+		BPHYT_RS18775	0.39	-2.7
4,221,800	+		BPHYT_RS18775	0.39	-1.7
4,221,801	-		BPHYT_RS18775	0.39	+0.6
4,221,801	-		BPHYT_RS18775	0.39	-2.0
4,222,055	-				-0.8
4,222,263	+		BPHYT_RS18775	0.64	-2.3
4,222,263	+		BPHYT_RS18775	0.64	-1.9
4,222,263	+		BPHYT_RS18775	0.64	-3.1
4,222,264	-		BPHYT_RS18775	0.64	-2.4
4,222,344	+		BPHYT_RS18775	0.69	-1.7
4,222,344	+		BPHYT_RS18775	0.69	-2.4
4,222,344	+		BPHYT_RS18775	0.69	-2.8
4,222,344	+		BPHYT_RS18775	0.69	-2.5
4,222,345	-		BPHYT_RS18775	0.69	-2.3
4,222,345	-		BPHYT_RS18775	0.69	-1.3
4,222,345	-		BPHYT_RS18775	0.69	+0.2
4,222,812	+				+0.1
4,222,812	+				-2.9
4,222,813	-				-1.8
4,222,813	-				-2.1
4,223,120	-		BPHYT_RS18780	0.22	-1.9
4,223,120	-		BPHYT_RS18780	0.22	-1.3
4,223,200	-		BPHYT_RS18780	0.30	-2.6
4,223,554	+		BPHYT_RS18780	0.66	-2.8
4,223,581	-		BPHYT_RS18780	0.69	-0.6
4,223,884	+				-1.6
4,223,884	+				-2.0
4,223,884	+				-1.1
4,223,884	+				-1.3
4,223,884	+				-2.0
4,223,885	-				+1.8
4,223,885	-				-3.2
4,223,885	-				-2.2
4,223,885	-				+0.2
4,223,885	-				-2.9
4,223,885	-				-3.2
4,223,885	-				-1.9
4,223,885	-				-2.3
4,223,885	-				-1.6
4,223,885	-				-1.8
4,223,885	-				-4.3