Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17830
Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,021,977 | + | +0.2 | |||
4,021,978 | - | -0.8 | |||
4,022,077 | - | +0.6 | |||
4,022,556 | - | BPHYT_RS17825 | 0.70 | +0.3 | |
4,022,688 | - | BPHYT_RS17825 | 0.88 | -0.2 | |
4,023,128 | + | BPHYT_RS17830 | 0.28 | -0.4 | |
4,023,128 | + | BPHYT_RS17830 | 0.28 | -1.4 | |
4,024,118 | + | +0.0 | |||
4,024,299 | + | -0.7 | |||
4,024,318 | - | +0.2 | |||
4,024,353 | + | BPHYT_RS17835 | 0.13 | -0.6 | |
4,024,455 | + | BPHYT_RS17835 | 0.23 | -0.7 | |
4,024,455 | + | BPHYT_RS17835 | 0.23 | -0.8 | |
4,024,807 | - | BPHYT_RS17835 | 0.60 | -0.1 | |
4,024,878 | + | BPHYT_RS17835 | 0.68 | -0.4 |
Or see this region's nucleotide sequence