Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17100

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
3,875,859	+		BPHYT_RS17095	0.69	-1.5
3,875,860	-		BPHYT_RS17095	0.69	-2.7
3,875,880	+		BPHYT_RS17095	0.70	+0.4
3,875,881	-		BPHYT_RS17095	0.70	-0.3
3,876,028	-		BPHYT_RS17095	0.79	-0.6
3,876,281	-				-1.1
3,876,281	-				-0.7
3,876,282	+				+0.1
3,876,282	+				-1.1
3,876,282	+				-0.1
3,876,283	-				-2.7
3,876,283	-				-0.4
3,876,408	-				-0.8
3,876,506	+				-0.4
3,876,507	-				-0.2
3,876,507	-				-0.1
3,876,507	-				+0.7
3,876,668	+				+0.3
3,876,676	+				-0.4
3,876,679	-				-1.9
3,876,693	+				-2.1
3,876,714	+				-2.2
3,876,875	+		BPHYT_RS17100	0.22	+0.4
3,876,875	+		BPHYT_RS17100	0.22	-1.6
3,876,978	-		BPHYT_RS17100	0.35	+0.2
3,877,142	+		BPHYT_RS17100	0.58	-1.2
3,877,142	+		BPHYT_RS17100	0.58	-1.8
3,877,142	+		BPHYT_RS17100	0.58	-2.8
3,877,142	+		BPHYT_RS17100	0.58	-2.2
3,877,142	+		BPHYT_RS17100	0.58	-2.6
3,877,142	+		BPHYT_RS17100	0.58	-2.6
3,877,142	+		BPHYT_RS17100	0.58	-3.2
3,877,143	-		BPHYT_RS17100	0.58	+0.5
3,877,143	-		BPHYT_RS17100	0.58	-2.2
3,877,143	-		BPHYT_RS17100	0.58	-1.7
3,877,144	+		BPHYT_RS17100	0.58	-2.5
3,877,144	+		BPHYT_RS17100	0.58	-2.2
3,877,144	+		BPHYT_RS17100	0.58	-0.4
3,877,145	-		BPHYT_RS17100	0.58	-3.4
3,877,167	-		BPHYT_RS17100	0.61	+0.1
3,877,329	-		BPHYT_RS17100	0.83	-3.0
3,877,453	+				-0.9
3,877,454	-				-0.5
3,877,531	+				-0.0
3,877,610	+		BPHYT_RS17105	0.14	+0.2
3,877,610	+		BPHYT_RS17105	0.14	-0.1
3,877,611	-		BPHYT_RS17105	0.14	-0.6
3,877,613	+		BPHYT_RS17105	0.14	-0.5
3,877,614	-		BPHYT_RS17105	0.15	-0.8
3,877,614	-		BPHYT_RS17105	0.15	-0.4
3,877,616	+		BPHYT_RS17105	0.15	-0.1
3,877,617	-		BPHYT_RS17105	0.15	-0.5
3,877,617	-		BPHYT_RS17105	0.15	+0.5
3,877,617	-		BPHYT_RS17105	0.15	-0.1
3,877,617	-		BPHYT_RS17105	0.15	+0.8
3,877,638	+		BPHYT_RS17105	0.19	+0.1
3,877,639	-		BPHYT_RS17105	0.19	-0.6
3,877,639	-		BPHYT_RS17105	0.19	-0.3
3,877,639	-		BPHYT_RS17105	0.19	+0.1
3,877,639	-		BPHYT_RS17105	0.19	-0.4
3,877,639	-		BPHYT_RS17105	0.19	-0.4
3,877,639	-				+0.5
3,877,805	+		BPHYT_RS17105	0.49	-0.7
3,877,806	-		BPHYT_RS17105	0.49	+0.1
3,877,838	+		BPHYT_RS17105	0.55	-0.4
3,877,848	+		BPHYT_RS17105	0.56	-0.2
3,877,849	-		BPHYT_RS17105	0.57	-0.2
3,877,872	+		BPHYT_RS17105	0.61	+0.0
3,877,872	+		BPHYT_RS17105	0.61	-0.6
3,877,872	+		BPHYT_RS17105	0.61	-0.5
3,877,888	-		BPHYT_RS17105	0.64	-0.1
3,877,974	+		BPHYT_RS17105	0.79	-0.9
3,877,990	-		BPHYT_RS17105	0.82	+0.2
3,877,990	-		BPHYT_RS17105	0.82	-0.8
3,877,998	+		BPHYT_RS17105	0.83	-0.3
3,877,999	-		BPHYT_RS17105	0.84	+0.4
3,877,999	-		BPHYT_RS17105	0.84	+0.2
3,877,999	-		BPHYT_RS17105	0.84	+0.9
3,878,058	+				+0.3
3,878,060	+				-1.0
3,878,166	-				-1.1
3,878,201	-				-0.2