Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS17025 and BPHYT_RS17030 are separated by 73 nucleotides BPHYT_RS17030 and BPHYT_RS17035 are separated by 94 nucleotides BPHYT_RS17035 and BPHYT_RS17040 are separated by 26 nucleotides BPHYT_RS17040 and BPHYT_RS17045 are separated by 248 nucleotides
BPHYT_RS17025: BPHYT_RS17025 - hypothetical protein, at 3,859,543 to 3,860,943
_RS17025
BPHYT_RS17030: BPHYT_RS17030 - lipid hydroperoxide peroxidase, at 3,861,017 to 3,861,517
_RS17030
BPHYT_RS17035: BPHYT_RS17035 - sugar kinase, at 3,861,612 to 3,862,550
_RS17035
BPHYT_RS17040: BPHYT_RS17040 - membrane protein, at 3,862,577 to 3,863,053
_RS17040
BPHYT_RS17045: BPHYT_RS17045 - histone, at 3,863,302 to 3,863,919
_RS17045
Position (kb)
3861
3862
3863 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3860.818 kb on + strand at 3860.941 kb on + strand at 3861.054 kb on + strand at 3861.365 kb on + strand, within BPHYT_RS17030 at 3861.515 kb on + strand at 3861.515 kb on + strand at 3861.596 kb on + strand at 3862.047 kb on + strand, within BPHYT_RS17035 at 3862.099 kb on - strand, within BPHYT_RS17035 at 3862.174 kb on - strand, within BPHYT_RS17035 at 3862.178 kb on - strand, within BPHYT_RS17035 at 3862.191 kb on + strand, within BPHYT_RS17035 at 3862.486 kb on - strand at 3862.549 kb on - strand at 3862.646 kb on + strand, within BPHYT_RS17040 at 3862.646 kb on + strand, within BPHYT_RS17040 at 3862.724 kb on - strand, within BPHYT_RS17040 at 3863.230 kb on + strand at 3863.230 kb on + strand at 3863.278 kb on + strand at 3863.279 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 3,860,818 + +0.1 3,860,941 + -1.5 3,861,054 + +0.1 3,861,365 + BPHYT_RS17030 0.69 -0.2 3,861,515 + +0.0 3,861,515 + +0.3 3,861,596 + -1.4 3,862,047 + BPHYT_RS17035 0.46 -2.7 3,862,099 - BPHYT_RS17035 0.52 -0.8 3,862,174 - BPHYT_RS17035 0.60 -2.8 3,862,178 - BPHYT_RS17035 0.60 -2.4 3,862,191 + BPHYT_RS17035 0.62 -2.6 3,862,486 - -3.3 3,862,549 - -1.5 3,862,646 + BPHYT_RS17040 0.14 -2.0 3,862,646 + BPHYT_RS17040 0.14 -1.3 3,862,724 - BPHYT_RS17040 0.31 -1.3 3,863,230 + -0.1 3,863,230 + -1.0 3,863,278 + -0.1 3,863,279 - -1.6
Or see this region's nucleotide sequence